Variant report

Variant	rs16923682
Chromosome Location	chr8:59613750-59613751
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs12678718	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16923727	1.00[JPT][hapmap]
rs16923739	0.88[AMR][1000 genomes]
rs16923744	0.88[AMR][1000 genomes]
rs2634496	0.88[AMR][1000 genomes]
rs2634514	0.83[AMR][1000 genomes]
rs2634516	0.83[AMR][1000 genomes]
rs2634518	0.83[AMR][1000 genomes]
rs2693434	0.83[AMR][1000 genomes]
rs2693438	0.88[AMR][1000 genomes]
rs2693440	0.88[AMR][1000 genomes]
rs2693448	0.88[AMR][1000 genomes]
rs2726576	0.88[AMR][1000 genomes]
rs2726602	0.83[AMR][1000 genomes]
rs750960	0.84[AMR][1000 genomes]
rs7834774	1.00[JPT][hapmap]
rs7840141	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890938	chr8:59355053-59809785	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv831325	chr8:59492580-59694443	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	esv3436252	chr8:59581925-59615994	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv1025575	chr8:59609825-59632135	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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