Variant report

Variant	rs16924373
Chromosome Location	chr8:59893665-59893666
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs16924346	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16924369	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17301816	1.00[ASN][1000 genomes]
rs9643507	1.00[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59887000-59895000	Weak transcription	NHDF-Ad	bronchial
2	chr8:59887600-59903600	Weak transcription	Osteobl	bone
3	chr8:59888000-59894000	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr8:59888000-59899400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr8:59888000-59903800	Weak transcription	Fetal Stomach	stomach
6	chr8:59889000-59893800	Strong transcription	Fetal Thymus	thymus
7	chr8:59889800-59899800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr8:59889800-59927000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr8:59890400-59903200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr8:59891000-59916600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr8:59891200-59903800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr8:59891200-59918000	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr8:59891600-59900800	Weak transcription	Primary hematopoietic stem cells	blood
14	chr8:59891600-59903800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr8:59891800-59904200	Weak transcription	Fetal Intestine Small	intestine
16	chr8:59892000-59895200	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr8:59892400-59894600	Weak transcription	Small Intestine	intestine
18	chr8:59892400-59898800	Weak transcription	Dnd41	blood
19	chr8:59892800-59896200	Enhancers	Primary T cells from cord blood	blood
20	chr8:59893200-59894600	Enhancers	Primary T helper naive cells from peripheral blood	blood
21	chr8:59893200-59895800	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr8:59893200-59896400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
23	chr8:59893400-59894000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
24	chr8:59893600-59893800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
25	chr8:59893600-59895400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
26	chr8:59893600-59896000	Enhancers	Thymus	Thymus

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