Variant report

Variant	rs16932049
Chromosome Location	chr11:15807130-15807131
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12277448	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12288168	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12290250	0.85[AFR][1000 genomes]
rs12291972	0.85[AFR][1000 genomes]
rs12294087	0.83[AMR][1000 genomes]
rs16932047	0.81[AFR][1000 genomes]
rs7106868	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7107032	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7115752	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7124181	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7126644	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7127009	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051187	chr11:15781277-15846536	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15806000-15810200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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