Variant report

Variant rs16962944
Chromosome Location chr15:33299826-33299827
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:33286800-33300000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr15:33286800-33301200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr15:33287200-33300400 Weak transcription NHDF-Ad bronchial
4 chr15:33288800-33309200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr15:33291200-33301200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr15:33294800-33300000 Weak transcription Osteobl bone
7 chr15:33294800-33300800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr15:33295000-33301200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr15:33297400-33300000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr15:33297400-33300400 Enhancers HSMMtube muscle
11 chr15:33297400-33300800 Enhancers Primary monocytes fromperipheralblood blood
12 chr15:33298000-33301000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr15:33298400-33300600 Enhancers Monocytes-CD14+_RO01746 blood
14 chr15:33299200-33300000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr15:33299200-33300400 Enhancers NH-A brain
16 chr15:33299200-33300600 Active TSS Thymus Thymus
17 chr15:33299200-33301200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr15:33299200-33301400 Enhancers HUES64 Cell Line embryonic stem cell
19 chr15:33299200-33301400 Enhancers Adipose Nuclei Adipose
20 chr15:33299200-33301600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr15:33299200-33301600 Enhancers Pancreatic Islets Pancreatic Islet
22 chr15:33299400-33300200 Enhancers Colon Smooth Muscle Colon
23 chr15:33299400-33300400 Enhancers HSMM muscle
24 chr15:33299400-33301400 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr15:33299400-33301400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr15:33299400-33301400 Enhancers HUES48 Cell Line embryonic stem cell
27 chr15:33299400-33301400 Enhancers HUES6 Cell Line embryonic stem cell
28 chr15:33299400-33301400 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr15:33299400-33301400 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr15:33299400-33301600 Enhancers Muscle Satellite Cultured Cells --
31 chr15:33299400-33301800 Enhancers NHLF lung
32 chr15:33299600-33300000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr15:33299600-33300000 Active TSS Brain Anterior Caudate brain
34 chr15:33299600-33300200 Active TSS Aorta Aorta
35 chr15:33299600-33300400 Enhancers Rectal Smooth Muscle rectum
36 chr15:33299600-33301400 Enhancers Primary T cells from cord blood blood
37 chr15:33299600-33301600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr15:33299600-33301600 Enhancers Stomach Smooth Muscle stomach
39 chr15:33299800-33300000 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr15:33299800-33300000 Enhancers Fetal Thymus thymus
41 chr15:33299800-33300600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr15:33299800-33301200 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr15:33299800-33305200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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