The 2.0 version of rSNPBase

Variant report

Variant rs16965455
Chromosome Location chr17:38105754-38105755
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38096400-38108400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr17:38100000-38105800 Enhancers Fetal Thymus thymus
3 chr17:38100800-38106800 Weak transcription Spleen Spleen
4 chr17:38100800-38107200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr17:38100800-38108400 Weak transcription Esophagus oesophagus
6 chr17:38101000-38106200 Weak transcription Liver Liver
7 chr17:38103200-38108400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr17:38103400-38106600 Weak transcription Placenta Placenta
9 chr17:38103600-38108200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr17:38103600-38108600 Weak transcription HMEC breast
11 chr17:38103800-38105800 Enhancers Primary B cells from cord blood blood
12 chr17:38104000-38105800 Enhancers Primary B cells from peripheral blood blood
13 chr17:38104000-38106400 Weak transcription Fetal Muscle Leg muscle
14 chr17:38104400-38108400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr17:38105000-38107000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr17:38105000-38107400 Weak transcription Lung lung
17 chr17:38105200-38106000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr17:38105200-38108400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr17:38105200-38108400 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr17:38105200-38108400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr17:38105200-38108600 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr17:38105400-38107200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr17:38105400-38108200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr17:38105400-38108200 Weak transcription Stomach Mucosa stomach
25 chr17:38105400-38108400 Weak transcription Primary T cells from cord blood blood
26 chr17:38105400-38108400 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr17:38105400-38108400 Weak transcription Fetal Lung lung
28 chr17:38105400-38108600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr17:38105400-38108600 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr17:38105400-38108600 Weak transcription Thymus Thymus
31 chr17:38105400-38108600 Weak transcription A549 lung
32 chr17:38105600-38106000 Weak transcription Left Ventricle heart
33 chr17:38105600-38106600 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr17:38105600-38106600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr17:38105600-38106800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr17:38105600-38106800 Weak transcription Primary hematopoietic stem cells blood
37 chr17:38105600-38107000 Enhancers HepG2 liver
38 chr17:38105600-38108200 Weak transcription Primary T cells fromperipheralblood blood
39 chr17:38105600-38108400 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr17:38105600-38108400 Weak transcription Fetal Intestine Large intestine
41 chr17:38105600-38108400 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015