The 2.0 version of rSNPBase

Variant report

Variant rs16973265
Chromosome Location chr15:42752542-42752543
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42701200-42766600 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr15:42720400-42759200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr15:42737200-42764800 Weak transcription A549 lung
4 chr15:42744000-42757400 Weak transcription Gastric stomach
5 chr15:42744000-42757600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr15:42744200-42753400 Weak transcription Primary T cells fromperipheralblood blood
7 chr15:42744200-42754000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr15:42744200-42754200 Weak transcription Small Intestine intestine
9 chr15:42744200-42755000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr15:42744200-42755200 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr15:42744200-42755200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr15:42744200-42755600 Weak transcription Spleen Spleen
13 chr15:42744200-42756800 Weak transcription Dnd41 blood
14 chr15:42744200-42757000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr15:42744200-42757400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr15:42744200-42757400 Weak transcription HepG2 liver
17 chr15:42744200-42757600 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr15:42744200-42762200 Weak transcription K562 blood
19 chr15:42744200-42763200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr15:42744200-42767000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr15:42744200-42781800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr15:42744200-42782400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr15:42746200-42753800 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr15:42746800-42755600 Weak transcription Hela-S3 cervix
25 chr15:42747200-42753600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr15:42747200-42755000 Weak transcription Fetal Intestine Small intestine
27 chr15:42747200-42755200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr15:42747400-42753800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr15:42749200-42761800 Weak transcription Brain Germinal Matrix brain
30 chr15:42749600-42764600 Weak transcription Colonic Mucosa Colon
31 chr15:42749800-42755400 Weak transcription Lung lung
32 chr15:42749800-42756600 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr15:42749800-42757400 Weak transcription Placenta Placenta
34 chr15:42749800-42758000 Weak transcription Pancreas Pancrea
35 chr15:42750000-42753400 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr15:42750000-42753400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr15:42750000-42753800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr15:42750000-42755600 Weak transcription Esophagus oesophagus
39 chr15:42750000-42782600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr15:42750200-42753200 Weak transcription Primary monocytes fromperipheralblood blood
41 chr15:42750200-42756000 Weak transcription Primary T cells from cord blood blood
42 chr15:42750200-42763600 Weak transcription Right Atrium heart
43 chr15:42750200-42766400 Weak transcription Right Ventricle heart
44 chr15:42750200-42782400 Weak transcription Aorta Aorta
45 chr15:42750400-42755000 Weak transcription Duodenum Mucosa Duodenum
46 chr15:42750400-42755600 Weak transcription Brain Anterior Caudate brain
47 chr15:42750400-42756800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr15:42750400-42757200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr15:42750400-42757200 Weak transcription Fetal Brain Female brain
50 chr15:42750400-42761600 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015