The 2.0 version of rSNPBase

Variant report

Variant rs57734638
Chromosome Location chr15:42749013-42749014
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42694600-42750600 Strong transcription Primary neutrophils fromperipheralblood blood
2 chr15:42701200-42766600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr15:42702200-42750200 Strong transcription Primary monocytes fromperipheralblood blood
4 chr15:42705800-42749200 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr15:42711800-42749200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr15:42720400-42759200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr15:42737200-42764800 Weak transcription A549 lung
8 chr15:42740800-42749200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr15:42742600-42749200 Weak transcription Pancreas Pancrea
10 chr15:42743200-42750200 Weak transcription Primary hematopoietic stem cells blood
11 chr15:42743800-42749400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr15:42744000-42749200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr15:42744000-42749200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr15:42744000-42749200 Weak transcription Esophagus oesophagus
15 chr15:42744000-42757400 Weak transcription Gastric stomach
16 chr15:42744000-42757600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr15:42744200-42749200 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr15:42744200-42749200 Weak transcription H9 Cell Line embryonic stem cell
19 chr15:42744200-42749200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr15:42744200-42749200 Weak transcription Brain Cingulate Gyrus brain
21 chr15:42744200-42749200 Weak transcription Colonic Mucosa Colon
22 chr15:42744200-42749200 Weak transcription Lung lung
23 chr15:42744200-42749400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr15:42744200-42749400 Weak transcription Liver Liver
25 chr15:42744200-42749400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr15:42744200-42749600 Weak transcription Fetal Brain Female brain
27 chr15:42744200-42749800 Weak transcription Placenta Amnion Placenta Amnion
28 chr15:42744200-42749800 Weak transcription Thymus Thymus
29 chr15:42744200-42750400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr15:42744200-42753400 Weak transcription Primary T cells fromperipheralblood blood
31 chr15:42744200-42754000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr15:42744200-42754200 Weak transcription Small Intestine intestine
33 chr15:42744200-42755000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr15:42744200-42755200 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr15:42744200-42755200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr15:42744200-42755600 Weak transcription Spleen Spleen
37 chr15:42744200-42756800 Weak transcription Dnd41 blood
38 chr15:42744200-42757000 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr15:42744200-42757400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr15:42744200-42757400 Weak transcription HepG2 liver
41 chr15:42744200-42757600 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr15:42744200-42762200 Weak transcription K562 blood
43 chr15:42744200-42763200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr15:42744200-42767000 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr15:42744200-42781800 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr15:42744200-42782400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr15:42744400-42749200 Weak transcription H1 Cell Line embryonic stem cell
48 chr15:42744400-42749200 Weak transcription Fetal Thymus thymus
49 chr15:42744800-42749200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr15:42745600-42749400 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015