Variant report

Variant rs16976868
Chromosome Location chr19:44404778-44404779
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44383000-44405200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr19:44397600-44405000 Weak transcription Fetal Heart heart
3 chr19:44397600-44405200 Weak transcription Brain Hippocampus Middle brain
4 chr19:44398800-44405600 Weak transcription Placenta Amnion Placenta Amnion
5 chr19:44399200-44405200 Weak transcription HSMMtube muscle
6 chr19:44399600-44405200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr19:44400200-44405000 Weak transcription Osteobl bone
8 chr19:44400400-44405000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr19:44400400-44405200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr19:44400600-44405200 Weak transcription Muscle Satellite Cultured Cells --
11 chr19:44401000-44405200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:44401200-44404800 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr19:44401200-44405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr19:44401200-44405200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr19:44401200-44405200 Weak transcription Pancreas Pancrea
16 chr19:44401200-44405200 Weak transcription Rectal Smooth Muscle rectum
17 chr19:44401200-44405200 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr19:44401200-44405400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr19:44401400-44405400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr19:44401600-44405200 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr19:44402000-44405200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr19:44402000-44405200 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr19:44402000-44405200 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr19:44402200-44405200 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr19:44402200-44405200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr19:44402200-44405200 Weak transcription Gastric stomach
27 chr19:44402200-44405200 Weak transcription Left Ventricle heart
28 chr19:44402200-44405200 Weak transcription Stomach Smooth Muscle stomach
29 chr19:44402600-44405200 Weak transcription Brain Inferior Temporal Lobe brain
30 chr19:44402800-44405200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr19:44402800-44405200 Weak transcription NHDF-Ad bronchial
32 chr19:44403200-44404800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr19:44403200-44404800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr19:44403200-44405200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr19:44403600-44405200 Weak transcription Fetal Kidney kidney
36 chr19:44404000-44404800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
37 chr19:44404000-44405200 ZNF genes & repeats Adipose Nuclei Adipose
38 chr19:44404000-44405400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
39 chr19:44404000-44434800 ZNF genes & repeats Liver Liver
40 chr19:44404200-44405200 Weak transcription Fetal Intestine Small intestine
41 chr19:44404200-44407000 ZNF genes & repeats GM12878-XiMat blood
42 chr19:44404400-44404800 ZNF genes & repeats Brain Cingulate Gyrus brain
43 chr19:44404400-44405000 Enhancers Brain Germinal Matrix brain
44 chr19:44404400-44405400 Weak transcription HSMM muscle
45 chr19:44404400-44406200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr19:44404600-44404800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr19:44404600-44405000 Weak transcription Primary T cells from cord blood blood
48 chr19:44404600-44405000 Weak transcription Fetal Brain Female brain
49 chr19:44404600-44405200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr19:44404600-44405200 Enhancers Cortex derived primary cultured neurospheres brain

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