Variant report

Variant	rs1698259
Chromosome Location	chr14:84381957-84381958
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12588746	0.98[ASN][1000 genomes]
rs1511319	0.91[ASN][1000 genomes]
rs1629389	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1705644	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1705647	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs1705648	0.91[ASN][1000 genomes]
rs1705650	0.90[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs1705664	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1756277	0.91[ASN][1000 genomes]
rs1756278	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1756292	0.81[AFR][1000 genomes]
rs6574760	0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902159	chr14:84336944-84447356	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1037238	chr14:84376916-84407921	Enhancers Weak transcription Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv528927	chr14:84378369-84390391	Enhancers Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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