Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr4:77024000-77024150	BE2_C	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:77014220..77016956-chr4:77022006..77024608,2	K562	blood:
2	chr4:77022675..77026827-chr4:77067488..77070849,4	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11097229	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17001391	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17001392	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17001393	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17001395	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17001396	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17001398	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17001534	0.95[ASN][1000 genomes]
rs17001542	0.95[ASN][1000 genomes]
rs17001551	0.83[ASN][1000 genomes]
rs35442986	0.95[ASN][1000 genomes]
rs3733255	0.83[ASN][1000 genomes]
rs3733256	0.83[ASN][1000 genomes]
rs4379080	1.00[ASN][1000 genomes]
rs56696020	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs60169811	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6826514	0.92[ASN][1000 genomes]
rs73825885	0.97[ASN][1000 genomes]
rs73826318	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73826361	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529613	chr4:76654941-77081576	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv1009047	chr4:76989180-77077885	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:77015200-77025400	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr4:77016400-77025000	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr4:77017000-77034400	Weak transcription	Right Ventricle	heart
4	chr4:77021200-77026600	Weak transcription	Brain Hippocampus Middle	brain
5	chr4:77024000-77032200	Weak transcription	Left Ventricle	heart

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