Variant report

Variant rs17006708
Chromosome Location chr3:20226659-20226660
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:20197000-20226800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:20197400-20227000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr3:20197600-20226800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr3:20213200-20227000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr3:20219400-20226800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:20220600-20226800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr3:20220800-20226800 Weak transcription Primary monocytes fromperipheralblood blood
8 chr3:20220800-20226800 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr3:20222600-20227000 Weak transcription Pancreas Pancrea
10 chr3:20222800-20226800 Weak transcription Fetal Muscle Trunk muscle
11 chr3:20222800-20227000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr3:20223000-20226800 Weak transcription H9 Cell Line embryonic stem cell
13 chr3:20223400-20226800 Weak transcription Fetal Intestine Small intestine
14 chr3:20223400-20227000 Weak transcription Left Ventricle heart
15 chr3:20223800-20226800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr3:20224200-20226800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr3:20224600-20226800 Weak transcription Gastric stomach
18 chr3:20224600-20229000 Active TSS GM12878-XiMat blood
19 chr3:20225800-20226800 Enhancers Primary neutrophils fromperipheralblood blood
20 chr3:20225800-20226800 Enhancers Monocytes-CD14+_RO01746 blood
21 chr3:20225800-20227000 Active TSS Fetal Thymus thymus
22 chr3:20225800-20227000 Flanking Active TSS HUVEC blood vessel
23 chr3:20225800-20227200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
24 chr3:20225800-20228600 Active TSS HUES64 Cell Line embryonic stem cell
25 chr3:20225800-20228600 Active TSS K562 blood
26 chr3:20225800-20228800 Active TSS HMEC breast
27 chr3:20225800-20229000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr3:20226000-20226800 Active TSS Fetal Brain Female brain
29 chr3:20226000-20227000 Flanking Active TSS Hela-S3 cervix
30 chr3:20226000-20227200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
31 chr3:20226000-20228600 Active TSS H1 Cell Line embryonic stem cell
32 chr3:20226000-20228600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:20226000-20228600 Active TSS Thymus Thymus
34 chr3:20226000-20228800 Active TSS NHDF-Ad bronchial
35 chr3:20226000-20229000 Active TSS ES-I3 Cell Line embryonic stem cell
36 chr3:20226000-20229000 Active TSS HUES48 Cell Line embryonic stem cell
37 chr3:20226000-20229000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
38 chr3:20226200-20226800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
39 chr3:20226200-20226800 Active TSS Duodenum Mucosa Duodenum
40 chr3:20226200-20226800 Flanking Active TSS Fetal Heart heart
41 chr3:20226200-20226800 Flanking Active TSS Fetal Kidney kidney
42 chr3:20226200-20226800 Enhancers Fetal Lung lung
43 chr3:20226200-20226800 Flanking Active TSS Dnd41 blood
44 chr3:20226200-20227000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr3:20226200-20227200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr3:20226200-20228800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr3:20226200-20228800 Active TSS NHEK skin
48 chr3:20226200-20229000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr3:20226200-20229200 Active TSS HUES6 Cell Line embryonic stem cell
50 chr3:20226200-20229200 Active TSS NHLF lung

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