The 2.0 version of rSNPBase

Variant report

Variant rs17007152
Chromosome Location chr1:220359347-220359348
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220305400-220376600 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr1:220325000-220398400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:220330600-220363600 Weak transcription Fetal Brain Male brain
4 chr1:220330800-220378600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:220341000-220361000 Weak transcription Small Intestine intestine
6 chr1:220341200-220364000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:220341200-220369200 Weak transcription Fetal Heart heart
8 chr1:220344800-220365600 Weak transcription Brain Substantia Nigra brain
9 chr1:220345200-220361200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:220345400-220361800 Weak transcription Colonic Mucosa Colon
11 chr1:220345400-220391400 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:220345600-220361400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr1:220346600-220360800 Weak transcription Fetal Kidney kidney
14 chr1:220346600-220363600 Weak transcription Brain Angular Gyrus brain
15 chr1:220348000-220386800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:220349600-220369600 Strong transcription Primary monocytes fromperipheralblood blood
17 chr1:220349800-220359600 Strong transcription Primary B cells from cord blood blood
18 chr1:220349800-220362600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:220350000-220386200 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr1:220350200-220359400 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr1:220350200-220360600 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:220350600-220361200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr1:220350600-220387800 Weak transcription Stomach Mucosa stomach
24 chr1:220350800-220359800 Weak transcription NHEK skin
25 chr1:220350800-220360800 Weak transcription Aorta Aorta
26 chr1:220350800-220360800 Weak transcription Rectal Smooth Muscle rectum
27 chr1:220350800-220361600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:220350800-220365200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:220350800-220365200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:220350800-220365200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:220350800-220365200 Weak transcription Fetal Brain Female brain
32 chr1:220350800-220365200 Weak transcription Spleen Spleen
33 chr1:220350800-220366000 Weak transcription Esophagus oesophagus
34 chr1:220350800-220378800 Weak transcription Pancreas Pancrea
35 chr1:220351800-220360000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:220353200-220386600 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr1:220353800-220386400 Strong transcription iPS-20b Cell Line embryonic stem cell
38 chr1:220354000-220368800 Strong transcription Fetal Thymus thymus
39 chr1:220354400-220359600 Weak transcription Colon Smooth Muscle Colon
40 chr1:220354400-220375000 Strong transcription GM12878-XiMat blood
41 chr1:220354400-220386800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:220354600-220363600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:220354800-220363600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:220355000-220369600 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:220355200-220360400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:220355200-220360600 Weak transcription Ovary ovary
47 chr1:220355200-220360800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr1:220355200-220361000 Weak transcription H9 Cell Line embryonic stem cell
49 chr1:220355200-220361200 Weak transcription HMEC breast
50 chr1:220355200-220361800 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015