Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10010113	1.00[EUR][1000 genomes]
rs10471025	1.00[EUR][1000 genomes]
rs10857101	0.83[AMR][1000 genomes]
rs1155357	0.83[AMR][1000 genomes]
rs1388986	0.83[AMR][1000 genomes]
rs1492748	0.83[AMR][1000 genomes]
rs1492752	0.83[AMR][1000 genomes]
rs1873772	0.83[AMR][1000 genomes]
rs219848	0.83[AMR][1000 genomes]
rs28567538	1.00[EUR][1000 genomes]
rs28592204	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28668989	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28730460	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs312513	0.83[AMR][1000 genomes]
rs312515	0.83[AMR][1000 genomes]
rs312516	0.83[AMR][1000 genomes]
rs312519	0.83[AMR][1000 genomes]
rs55874952	1.00[EUR][1000 genomes]
rs57392145	1.00[EUR][1000 genomes]
rs60792792	1.00[EUR][1000 genomes]
rs61255787	1.00[EUR][1000 genomes]
rs73845356	1.00[EUR][1000 genomes]
rs73845360	1.00[EUR][1000 genomes]
rs73845362	1.00[EUR][1000 genomes]
rs73845363	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73845366	1.00[EUR][1000 genomes]
rs73845371	1.00[EUR][1000 genomes]
rs996287	0.83[AMR][1000 genomes]
rs9992551	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868977	chr4:124841128-125550637	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv879880	chr4:125174817-125494547	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2760890	chr4:125273456-125466931	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125450800-125452200	Enhancers	NHDF-Ad	bronchial
2	chr4:125451000-125454400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr4:125451200-125452000	Flanking Active TSS	Liver	Liver
4	chr4:125451400-125451800	Flanking Active TSS	HepG2	liver
5	chr4:125451400-125452400	Enhancers	Fetal Intestine Large	intestine
6	chr4:125451600-125452400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr4:125451600-125452400	Enhancers	Fetal Intestine Small	intestine

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