The 2.0 version of rSNPBase

Variant report

Variant rs17009647
Chromosome Location chr2:30752826-30752827
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30729000-30764600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:30733000-30756000 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr2:30734800-30764000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:30738000-30757000 Weak transcription Ovary ovary
5 chr2:30738200-30758200 Weak transcription Right Ventricle heart
6 chr2:30738400-30756200 Weak transcription Hela-S3 cervix
7 chr2:30743000-30754800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:30743000-30756000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr2:30743000-30756000 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr2:30743000-30756000 Weak transcription HepG2 liver
11 chr2:30743000-30757000 Weak transcription Left Ventricle heart
12 chr2:30743000-30758200 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr2:30743000-30758200 Weak transcription Pancreas Pancrea
14 chr2:30743000-30758400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:30743000-30758600 Weak transcription H9 Cell Line embryonic stem cell
16 chr2:30743000-30759000 Weak transcription Gastric stomach
17 chr2:30743000-30759800 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr2:30743000-30759800 Weak transcription Esophagus oesophagus
19 chr2:30743000-30761000 Weak transcription NHEK skin
20 chr2:30743000-30763600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr2:30743000-30764600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr2:30743000-30764600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr2:30743000-30767400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr2:30743000-30768000 Weak transcription Rectal Smooth Muscle rectum
25 chr2:30743200-30755800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr2:30743200-30755800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr2:30743200-30756000 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr2:30743200-30756000 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr2:30743200-30756000 Weak transcription Fetal Intestine Large intestine
30 chr2:30743200-30757000 Weak transcription Fetal Stomach stomach
31 chr2:30743200-30757000 Weak transcription Lung lung
32 chr2:30743200-30757400 Weak transcription Fetal Muscle Trunk muscle
33 chr2:30743200-30760800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr2:30743600-30756000 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr2:30743600-30756200 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr2:30744000-30756000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:30744000-30756000 Weak transcription Fetal Thymus thymus
38 chr2:30744000-30756200 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr2:30746000-30757600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr2:30746400-30754600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr2:30746400-30757200 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr2:30746400-30758200 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr2:30748200-30757600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr2:30748800-30757400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr2:30748800-30758200 Weak transcription Fetal Brain Male brain
46 chr2:30749000-30754800 Strong transcription Primary hematopoietic stem cells blood
47 chr2:30749000-30756000 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr2:30749000-30756000 Weak transcription Adipose Nuclei Adipose
49 chr2:30749000-30756000 Weak transcription Thymus Thymus
50 chr2:30749000-30757000 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015