The 2.0 version of rSNPBase

Variant report

Variant rs72863019
Chromosome Location chr2:30848788-30848789
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30758600-30853800 Weak transcription Thymus Thymus
2 chr2:30792600-30863000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr2:30792800-30851400 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr2:30811600-30863000 Weak transcription Ovary ovary
5 chr2:30831600-30852800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr2:30831800-30863000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:30834600-30863800 Weak transcription Aorta Aorta
8 chr2:30834800-30849400 Weak transcription Pancreas Pancrea
9 chr2:30835600-30851200 Weak transcription HSMMtube muscle
10 chr2:30835800-30848800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:30835800-30871200 Weak transcription Small Intestine intestine
12 chr2:30836000-30854000 Weak transcription Primary hematopoietic stem cells blood
13 chr2:30836000-30855200 Weak transcription Fetal Muscle Leg muscle
14 chr2:30837600-30863000 Weak transcription HepG2 liver
15 chr2:30838400-30850200 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr2:30839000-30854000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr2:30839400-30849000 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr2:30839400-30850800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr2:30840000-30861600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr2:30841800-30872200 Weak transcription Spleen Spleen
21 chr2:30843400-30864800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr2:30844800-30852400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr2:30845000-30852800 Weak transcription Primary T cells fromperipheralblood blood
24 chr2:30845000-30853600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr2:30845200-30850000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr2:30845200-30853800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:30845200-30855200 Weak transcription Primary B cells from cord blood blood
28 chr2:30845400-30849400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr2:30845400-30853800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr2:30845400-30862600 Weak transcription Left Ventricle heart
31 chr2:30845400-30862800 Weak transcription Right Ventricle heart
32 chr2:30845400-30863000 Weak transcription Stomach Smooth Muscle stomach
33 chr2:30845600-30852800 Weak transcription Primary T cells from cord blood blood
34 chr2:30845600-30853600 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr2:30845600-30854000 Weak transcription Fetal Thymus thymus
36 chr2:30845600-30861200 Weak transcription Fetal Lung lung
37 chr2:30845600-30861600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:30845600-30861600 Weak transcription Duodenum Mucosa Duodenum
39 chr2:30845600-30863000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr2:30845600-30863000 Weak transcription A549 lung
41 chr2:30845600-30877800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:30845800-30877800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:30846200-30863000 Weak transcription Fetal Intestine Large intestine
44 chr2:30848000-30850200 Enhancers Fetal Heart heart
45 chr2:30848200-30849600 Enhancers Pancreatic Islets Pancreatic Islet
46 chr2:30848600-30849000 Enhancers K562 blood
47 chr2:30848600-30851000 Flanking Active TSS GM12878-XiMat blood

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Last update: Aug 31, 2015