The 2.0 version of rSNPBase

Variant report

Variant rs57890362
Chromosome Location chr2:30789016-30789017
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30749000-30812600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:30757800-30809000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr2:30758200-30795000 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr2:30758600-30853800 Weak transcription Thymus Thymus
5 chr2:30758800-30809600 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr2:30759200-30805600 Weak transcription K562 blood
7 chr2:30764000-30792400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:30765000-30793600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr2:30766800-30810200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:30773400-30792200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:30774200-30793200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr2:30774600-30790200 Weak transcription A549 lung
13 chr2:30774600-30790400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:30774800-30812000 Weak transcription Fetal Lung lung
15 chr2:30777000-30815800 Weak transcription Fetal Intestine Small intestine
16 chr2:30781200-30795200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr2:30782800-30790400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr2:30783000-30793000 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr2:30783400-30791800 Weak transcription NHEK skin
20 chr2:30783400-30806000 Weak transcription GM12878-XiMat blood
21 chr2:30783400-30819800 Weak transcription Stomach Smooth Muscle stomach
22 chr2:30783600-30789400 Weak transcription Primary monocytes fromperipheralblood blood
23 chr2:30783800-30793000 Weak transcription Fetal Stomach stomach
24 chr2:30783800-30796000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr2:30783800-30811000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr2:30784000-30791800 Weak transcription Fetal Kidney kidney
27 chr2:30784000-30797400 Weak transcription Brain Cingulate Gyrus brain
28 chr2:30784000-30812200 Weak transcription NH-A brain
29 chr2:30784200-30793400 Strong transcription Primary B cells from cord blood blood
30 chr2:30784400-30793200 Weak transcription Placenta Placenta
31 chr2:30784600-30792600 Weak transcription Muscle Satellite Cultured Cells --
32 chr2:30784600-30793800 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr2:30784600-30798800 Weak transcription Liver Liver
34 chr2:30784800-30802400 Weak transcription Fetal Muscle Leg muscle
35 chr2:30784800-30804000 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr2:30785000-30794400 Weak transcription HMEC breast
37 chr2:30785200-30806800 Weak transcription Lung lung
38 chr2:30785200-30826600 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr2:30785400-30818800 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr2:30785800-30802800 Weak transcription Dnd41 blood
41 chr2:30786200-30791800 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr2:30786200-30806400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr2:30786400-30790000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr2:30786400-30797600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr2:30786600-30790800 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr2:30786600-30794400 Weak transcription Duodenum Mucosa Duodenum
47 chr2:30786600-30797400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr2:30786600-30797800 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr2:30786600-30808200 Weak transcription Left Ventricle heart
50 chr2:30786600-30818200 Weak transcription Rectal Mucosa Donor 31 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015