Variant report

Variant	rs17012201
Chromosome Location	chr4:128124404-128124405
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10005229	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10009211	1.00[AMR][1000 genomes]
rs10015247	1.00[AMR][1000 genomes]
rs10518519	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1443063	1.00[AMR][1000 genomes]
rs17012276	1.00[AMR][1000 genomes]
rs17012296	1.00[AMR][1000 genomes]
rs28404304	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28563099	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28623758	1.00[AMR][1000 genomes]
rs28624876	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28715385	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28716200	1.00[AMR][1000 genomes]
rs55731400	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73846470	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7659466	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7693966	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9995695	1.00[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128123000-128125000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr4:128124200-128126200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:128124400-128125000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links