Variant report

Variant	rs17012899
Chromosome Location	chr4:128981893-128981894
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:128981341-128983767	GM12878	blood:	n/a	n/a
2	TAF1	chr4:128981705-128983761	H1-hESC	embryonic stem cell:	n/a	n/a
3	NR2F2	chr4:128981757-128982683	MCF-7	breast:	n/a	n/a
4	E2F4	chr4:128981415-128982595	MCF10A-Er-Src	breast:	n/a	chr4:128981810-128981819 chr4:128982158-128982168 chr4:128981810-128981822 chr4:128981966-128981976
5	TEAD4	chr4:128981707-128982272	K562	blood:	n/a	n/a
6	TAF1	chr4:128981891-128982693	GM12891	blood:	n/a	n/a
7	POLR2A	chr4:128981701-128983708	Hela-S3	cervix:	n/a	n/a
8	POLR2A	chr4:128981689-128982806	ECC-1	luminal epithelium:	n/a	n/a
9	POLR2A	chr4:128981635-128983750	H1-hESC	embryonic stem cell:	n/a	n/a
10	JUND	chr4:128981667-128982567	H1-hESC	embryonic stem cell:	n/a	n/a
11	POLR2A	chr4:128981803-128982959	MCF-7	breast:	n/a	n/a
12	RELA	chr4:128981728-128983580	GM15510	blood:	n/a	n/a
13	ZNF263	chr4:128981770-128983633	K562	blood:	n/a	chr4:128982256-128982277
14	PML	chr4:128981665-128982733	K562	blood:	n/a	n/a
15	TAF7	chr4:128981871-128982719	H1-hESC	embryonic stem cell:	n/a	n/a
16	POLR2A	chr4:128981693-128982760	GM12892	blood:	n/a	n/a
17	CTCF	chr4:128981840-128981990	AG09319	gingival:	n/a	n/a
18	MYC	chr4:128981397-128983701	K562	blood:	n/a	chr4:128982117-128982126 chr4:128982024-128982034 chr4:128983439-128983448 chr4:128983126-128983135 chr4:128982117-128982127
19	MAX	chr4:128981696-128983718	K562	blood:	n/a	chr4:128982117-128982126 chr4:128982024-128982034 chr4:128983439-128983448 chr4:128983126-128983135 chr4:128982117-128982127
20	CTCF	chr4:128981862-128982041	GM12891	blood:	n/a	n/a
21	POLR2A	chr4:128981730-128983695	ECC-1	luminal epithelium:	n/a	n/a
22	MYC	chr4:128981856-128981960	Hela-S3	cervix:	n/a	n/a
23	POLR2A	chr4:128981211-128982633	K562	blood:	n/a	n/a
24	RUNX3	chr4:128981701-128982672	GM12878	blood:	n/a	n/a
25	TBP	chr4:128981567-128982674	HepG2	liver:	n/a	n/a
26	POLR2A	chr4:128981660-128983600	GM12878	blood:	n/a	n/a
27	RCOR1	chr4:128981537-128983729	K562	blood:	n/a	n/a
28	POLR2A	chr4:128981661-128983699	K562	blood:	n/a	n/a
29	RCOR1	chr4:128981871-128982543	K562	blood:	n/a	n/a
30	E2F6	chr4:128981885-128982679	A549	lung:	n/a	chr4:128982158-128982168 chr4:128981966-128981976
31	MAX	chr4:128981832-128982566	H1-hESC	embryonic stem cell:	n/a	chr4:128982117-128982126 chr4:128982024-128982034 chr4:128982117-128982127
32	CEBPB	chr4:128981764-128982617	Hela-S3	cervix:	n/a	n/a
33	MAX	chr4:128981302-128983662	K562	blood:	n/a	chr4:128982117-128982126 chr4:128982024-128982034 chr4:128983439-128983448 chr4:128983126-128983135 chr4:128982117-128982127
34	MXI1	chr4:128981843-128982516	K562	blood:	n/a	n/a
35	POLR2A	chr4:128981813-128982808	A549	lung:	n/a	n/a
36	GATA3	chr4:128981722-128982610	MCF-7	breast:	n/a	n/a
37	YY1	chr4:128981812-128982824	GM12878	blood:	n/a	chr4:128982410-128982424 chr4:128982223-128982237 chr4:128982631-128982642 chr4:128981988-128982002 chr4:128982145-128982159 chr4:128982155-128982169
38	POLR2A	chr4:128981734-128982670	H1-hESC	embryonic stem cell:	n/a	n/a
39	POLR2A	chr4:128981647-128982748	K562	blood:	n/a	n/a
40	MYC	chr4:128981816-128982642	MCF-7	breast:	n/a	chr4:128982024-128982034 chr4:128982117-128982126 chr4:128982117-128982127
41	POLR2A	chr4:128981729-128983022	H1-hESC	embryonic stem cell:	n/a	n/a
42	MBD4	chr4:128981874-128982276	HepG2	liver:	n/a	n/a
43	POLR2A	chr4:128981401-128982868	K562	blood:	n/a	n/a
44	TRIM28	chr4:128981837-128982585	K562	blood:	n/a	n/a
45	POLR2A	chr4:128981718-128983089	HCT-116	colon:	n/a	n/a
46	POLR2A	chr4:128981724-128983679	Hela-S3	cervix:	n/a	n/a
47	MAX	chr4:128981606-128983900	HCT-116	colon:	n/a	chr4:128982117-128982126 chr4:128982024-128982034 chr4:128983439-128983448 chr4:128983126-128983135 chr4:128982117-128982127
48	POU2F2	chr4:128981892-128982771	GM12891	blood:	n/a	chr4:128982292-128982304 chr4:128982289-128982301
49	POLR2A	chr4:128981777-128983619	K562	blood:	n/a	n/a
50	POLR2A	chr4:128981744-128982579	SK-N-MC	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:128981378..128983346-chr4:128988931..128991317,2	MCF-7	breast:
2	chr4:128884518..128888041-chr4:128980422..128985043,7	MCF-7	breast:
3	chr12:104324118..104324690-chr4:128981820..128982436,2	Hela-S3	cervix:
4	chr4:128553197..128555974-chr4:128981706..128984336,2	K562	blood:
5	chr4:128981725..128985397-chr4:129207989..129209697,3	K562	blood:
6	chr4:128800019..128803742-chr4:128979765..128984325,9	K562	blood:
7	chr4:128885127..128890546-chr4:128980550..128983845,11	K562	blood:
8	chr4:128980795..128982891-chr4:129730267..129732892,3	K562	blood:
9	chr4:128980795..128984031-chr4:129730059..129735028,7	K562	blood:
10	chr4:128981817..128983526-chr4:129043171..129045384,2	MCF-7	breast:
11	chr4:128701934..128705815-chr4:128979420..128985014,7	K562	blood:
12	chr4:128884064..128888795-chr4:128980591..128984632,7	MCF-7	breast:
13	chr4:128701934..128705815-chr4:128979420..128984468,5	K562	blood:
14	chr4:128980817..128984026-chr4:129207052..129210590,3	MCF-7	breast:
15	chr4:128981698..128985397-chr4:129207989..129210555,4	K562	blood:
16	chr4:128981661..128982334-chr6:130031273..130031967,2	NB4	blood:
17	chr4:128980866..128984600-chr4:128984636..128991176,13	K562	blood:
18	chr4:128980667..128982380-chr4:129732444..129734327,2	MCF-7	breast:
19	chr4:128702147..128704685-chr4:128980177..128982661,2	MCF-7	breast:
20	chr4:128980375..128984020-chr4:128989687..128993521,7	MCF-7	breast:
21	chr4:128884948..128891801-chr4:128980633..128984811,17	K562	blood:
22	chr4:128800672..128803742-chr4:128979765..128985676,12	K562	blood:
23	chr4:128593863..128595593-chr4:128981619..128984198,2	K562	blood:

Variant related genes	Relation type
LARP1B	TF binding region
ENSG00000164073	Chromatin interaction
ENSG00000146376	Chromatin interaction
ENSG00000164066	Chromatin interaction
ENSG00000164070	Chromatin interaction
ENSG00000265072	Chromatin interaction
ENSG00000077684	Chromatin interaction
ENSG00000164040	Chromatin interaction
ENSG00000241651	Chromatin interaction
ENSG00000166598	Chromatin interaction
ENSG00000142731	Chromatin interaction
ENSG00000138709	Chromatin interaction
ENSG00000164074	Chromatin interaction

Extended variants
information (count: 110 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:79)

rs_ID	r²[population]
rs11940642	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.84[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs11942726	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.84[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.88[ASN][1000 genomes]
rs11944947	0.92[ASN][1000 genomes]
rs16997978	1.00[CEU][hapmap];0.95[CHB][hapmap];0.88[CHD][hapmap];0.84[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17012727	1.00[CEU][hapmap];0.95[CHB][hapmap];0.84[JPT][hapmap]
rs17012743	1.00[CEU][hapmap];0.95[CHB][hapmap];0.84[JPT][hapmap]
rs17012750	1.00[CEU][hapmap];0.95[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];0.84[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17012788	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.84[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs17012836	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17012841	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17012856	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17012870	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2007733	0.84[ASN][1000 genomes]
rs2015987	0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2276898	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];0.84[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.85[ASN][1000 genomes]
rs2276899	0.85[ASN][1000 genomes]
rs2276900	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.84[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.85[ASN][1000 genomes]
rs35763794	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs3733319	1.00[CHB][hapmap];0.91[CHD][hapmap];0.84[JPT][hapmap]
rs4426798	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.85[ASN][1000 genomes]
rs4431238	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.84[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.85[ASN][1000 genomes]
rs4470641	0.85[ASN][1000 genomes]
rs4535346	1.00[CEU][hapmap];0.85[CHD][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap]
rs56699332	0.82[ASN][1000 genomes]
rs57257129	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57431280	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57487637	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57872423	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58225850	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58546713	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58569950	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59984114	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60505265	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60665827	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60979346	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61027047	0.85[ASN][1000 genomes]
rs6817374	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6818207	1.00[CEU][hapmap]
rs6840241	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6850549	1.00[CEU][hapmap];0.94[CHB][hapmap];0.88[CHD][hapmap];0.83[MEX][hapmap];1.00[TSI][hapmap]
rs6850726	0.95[CHB][hapmap];0.88[CHD][hapmap];0.84[JPT][hapmap];0.84[MEX][hapmap];1.00[TSI][hapmap]
rs72616971	0.84[ASN][1000 genomes]
rs72616972	0.85[ASN][1000 genomes]
rs72616973	0.85[ASN][1000 genomes]
rs72616974	0.85[ASN][1000 genomes]
rs72616975	0.85[ASN][1000 genomes]
rs72616976	0.86[ASN][1000 genomes]
rs72616977	0.88[ASN][1000 genomes]
rs72616978	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72618806	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72618807	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618808	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618809	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618810	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618811	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618812	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618813	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618814	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72618815	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72618816	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72618817	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72618818	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618819	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618820	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618821	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618822	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618823	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618824	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618825	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72618826	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618827	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72618828	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618829	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72618830	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72618831	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72618832	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72618833	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72618834	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72618835	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:31 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879915	chr4:128167093-129150590	Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv879923	chr4:128554404-129068179	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	esv1792644	chr4:128566686-129133826	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	esv1795770	chr4:128566686-129145581	Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
5	nsv532740	chr4:128710011-129035335	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
6	esv3416036	chr4:128782694-129133956	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
7	nsv1033701	chr4:128803159-129095018	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
8	esv1841203	chr4:128817558-129043809	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
9	nsv1029890	chr4:128828468-129041302	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
10	esv1817670	chr4:128850073-129012181	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
11	esv1821180	chr4:128850073-129012181	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
12	nsv1018952	chr4:128850790-129082821	Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
13	nsv595388	chr4:128853913-129084831	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
14	nsv1019555	chr4:128901614-129088903	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
15	esv3390887	chr4:128932563-129207255	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
16	esv1800378	chr4:128954647-128986874	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
17	esv1801389	chr4:128954647-128986874	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
18	esv1802601	chr4:128954647-128986874	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
19	esv3353674	chr4:128958396-128983454	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
20	esv3430549	chr4:128958396-128987680	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
21	esv3385008	chr4:128959396-128991050	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
22	esv1795256	chr4:128960569-128983211	Enhancers Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
23	esv1797884	chr4:128960569-128983211	Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
24	esv1800439	chr4:128972357-128986874	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
25	esv1800138	chr4:128981336-128983211	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
26	esv1803700	chr4:128981336-128983211	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
27	esv1836544	chr4:128981336-128983211	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
28	esv1838939	chr4:128981336-128983211	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
29	esv1802578	chr4:128981336-128986874	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
30	esv1836174	chr4:128981336-128995640	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
31	esv1837247	chr4:128981336-128995640	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128981000-128982800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr4:128981000-128983200	Active TSS	Rectal Mucosa Donor 29	rectum
3	chr4:128981000-128983600	Active TSS	Liver	Liver
4	chr4:128981000-128983800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr4:128981000-128984400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr4:128981000-128984400	Active TSS	Duodenum Mucosa	Duodenum
7	chr4:128981000-128984400	Active TSS	Pancreatic Islets	Pancreatic Islet
8	chr4:128981000-128984400	Active TSS	Rectal Smooth Muscle	rectum
9	chr4:128981200-128982000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
10	chr4:128981200-128982200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr4:128981200-128982200	Active TSS	Stomach Mucosa	stomach
12	chr4:128981200-128983200	Active TSS	Primary T regulatory cells fromperipheralblood	blood
13	chr4:128981200-128983400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr4:128981200-128983600	Active TSS	Primary T killer memory cells from peripheral blood	blood
15	chr4:128981200-128983600	Active TSS	Colon Smooth Muscle	Colon
16	chr4:128981200-128983600	Active TSS	Osteobl	bone
17	chr4:128981200-128983800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr4:128981200-128983800	Active TSS	Brain Hippocampus Middle	brain
19	chr4:128981200-128983800	Active TSS	Psoas Muscle	Psoas
20	chr4:128981200-128984000	Active TSS	Duodenum Smooth Muscle	Duodenum
21	chr4:128981200-128984000	Active TSS	NHEK	skin
22	chr4:128981200-128984200	Active TSS	Brain Angular Gyrus	brain
23	chr4:128981200-128984200	Active TSS	Fetal Intestine Large	intestine
24	chr4:128981200-128984200	Active TSS	GM12878-XiMat	blood
25	chr4:128981200-128984400	Active TSS	ES-I3 Cell Line	embryonic stem cell
26	chr4:128981200-128984400	Active TSS	HUES64 Cell Line	embryonic stem cell
27	chr4:128981200-128984400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr4:128981200-128984400	Active TSS	Fetal Intestine Small	intestine
29	chr4:128981200-128984400	Active TSS	Fetal Kidney	kidney
30	chr4:128981200-128984400	Active TSS	Fetal Stomach	stomach
31	chr4:128981200-128984400	Active TSS	Rectal Mucosa Donor 31	rectum
32	chr4:128981400-128982000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr4:128981400-128982000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
34	chr4:128981400-128982000	Flanking Active TSS	HUVEC	blood vessel
35	chr4:128981400-128982000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
36	chr4:128981400-128982200	Flanking Active TSS	Primary B cells from cord blood	blood
37	chr4:128981400-128982200	Flanking Active TSS	Primary hematopoietic stem cells	blood
38	chr4:128981400-128982200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
39	chr4:128981400-128982200	Active TSS	Fetal Brain Male	brain
40	chr4:128981400-128982800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr4:128981400-128983400	Active TSS	Fetal Lung	lung
42	chr4:128981400-128983400	Active TSS	Fetal Muscle Trunk	muscle
43	chr4:128981400-128983400	Active TSS	Fetal Thymus	thymus
44	chr4:128981400-128983400	Active TSS	Skeletal Muscle Male	skeletal muscle
45	chr4:128981400-128983400	Active TSS	Skeletal Muscle Female	skeletal muscle
46	chr4:128981400-128983400	Active TSS	Thymus	Thymus
47	chr4:128981400-128983600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr4:128981400-128983600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
49	chr4:128981400-128983600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr4:128981400-128983600	Active TSS	Brain Anterior Caudate	brain

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