The 2.0 version of rSNPBase

Variant report

Variant rs17022209
Chromosome Location chr2:98394211-98394212
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:98352200-98398800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr2:98366200-98400000 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr2:98368600-98413000 Weak transcription H9 Cell Line embryonic stem cell
4 chr2:98369600-98398800 Strong transcription Fetal Muscle Leg muscle
5 chr2:98370600-98407600 Weak transcription HUVEC blood vessel
6 chr2:98371200-98398600 Strong transcription Primary B cells from cord blood blood
7 chr2:98377200-98394400 Strong transcription Rectal Mucosa Donor 31 rectum
8 chr2:98377400-98408000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr2:98377400-98410600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr2:98378600-98421400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr2:98381400-98397600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr2:98382800-98398600 Weak transcription Small Intestine intestine
13 chr2:98382800-98419800 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr2:98383000-98408600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr2:98383200-98408800 Weak transcription Fetal Brain Male brain
16 chr2:98383200-98420200 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr2:98383400-98405600 Weak transcription A549 lung
18 chr2:98384000-98398800 Weak transcription Stomach Mucosa stomach
19 chr2:98385400-98399200 Strong transcription Primary B cells from peripheral blood blood
20 chr2:98385800-98398800 Strong transcription Fetal Stomach stomach
21 chr2:98386000-98398800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:98386200-98398000 Strong transcription Fetal Intestine Large intestine
23 chr2:98386200-98398800 Strong transcription Fetal Muscle Trunk muscle
24 chr2:98386400-98395600 Weak transcription Right Atrium heart
25 chr2:98386600-98398200 Strong transcription Skeletal Muscle Female skeletal muscle
26 chr2:98386800-98395600 Weak transcription Fetal Heart heart
27 chr2:98387400-98394400 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr2:98387800-98408000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr2:98387800-98408000 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr2:98387800-98438200 Weak transcription H1 Cell Line embryonic stem cell
31 chr2:98388000-98396200 Strong transcription Sigmoid Colon Sigmoid Colon
32 chr2:98388000-98398800 Strong transcription Fetal Intestine Small intestine
33 chr2:98388000-98407800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr2:98388000-98408600 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr2:98388200-98394400 Strong transcription Liver Liver
36 chr2:98388400-98395600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr2:98388800-98395600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr2:98389000-98395600 Weak transcription Primary hematopoietic stem cells blood
39 chr2:98389000-98408200 Weak transcription NH-A brain
40 chr2:98390200-98407600 Weak transcription Psoas Muscle Psoas
41 chr2:98390200-98408000 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr2:98391000-98402400 Weak transcription Rectal Smooth Muscle rectum
43 chr2:98391200-98395400 Weak transcription K562 blood
44 chr2:98391400-98408000 Weak transcription Muscle Satellite Cultured Cells --
45 chr2:98392000-98405000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr2:98392200-98404400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr2:98392200-98407600 Weak transcription NHLF lung
48 chr2:98392200-98409200 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr2:98392400-98395400 Weak transcription Brain Substantia Nigra brain
50 chr2:98392400-98395400 Weak transcription NHEK skin

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Last update: Aug 31, 2015