The 2.0 version of rSNPBase

Variant report

Variant rs17023023
Chromosome Location chr1:214637126-214637127
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214613000-214649400 Weak transcription Lung lung
2 chr1:214620000-214637400 Weak transcription Fetal Brain Male brain
3 chr1:214620800-214637800 Weak transcription Fetal Muscle Trunk muscle
4 chr1:214621000-214639800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:214625800-214644800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:214627200-214640000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:214628600-214637600 Weak transcription Ovary ovary
8 chr1:214628600-214637800 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:214628600-214637800 Weak transcription Placenta Placenta
10 chr1:214628600-214640600 Weak transcription Right Atrium heart
11 chr1:214628800-214639400 Weak transcription Stomach Mucosa stomach
12 chr1:214629000-214637800 Weak transcription Right Ventricle heart
13 chr1:214629200-214644800 Weak transcription Psoas Muscle Psoas
14 chr1:214633600-214638000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:214634000-214638600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:214634200-214638000 Weak transcription Pancreas Pancrea
17 chr1:214634200-214640000 Weak transcription Fetal Kidney kidney
18 chr1:214634400-214637800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr1:214634400-214639800 Weak transcription Fetal Lung lung
20 chr1:214634400-214639800 Weak transcription A549 lung
21 chr1:214634400-214640000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr1:214634400-214644400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr1:214634400-214645000 Weak transcription HUVEC blood vessel
24 chr1:214634400-214646200 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr1:214634600-214637600 Strong transcription Fetal Stomach stomach
26 chr1:214634800-214638200 Strong transcription Fetal Intestine Large intestine
27 chr1:214634800-214640000 Weak transcription H1 Cell Line embryonic stem cell
28 chr1:214635000-214637800 Weak transcription Spleen Spleen
29 chr1:214635000-214638400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:214635000-214638600 Strong transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:214635200-214637200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:214635200-214638400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:214635600-214637800 Weak transcription Gastric stomach
34 chr1:214635600-214638000 Genic enhancers HMEC breast
35 chr1:214635800-214637200 Genic enhancers NHDF-Ad bronchial
36 chr1:214635800-214638200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:214635800-214645000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:214636000-214637200 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr1:214636000-214637200 Enhancers HepG2 liver
40 chr1:214636000-214637800 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr1:214636000-214638600 Strong transcription NHLF lung
42 chr1:214636200-214640600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr1:214636400-214637800 Genic enhancers Osteobl bone
44 chr1:214636400-214638200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:214636400-214638600 Enhancers Fetal Heart heart
46 chr1:214636600-214638000 Enhancers HUES64 Cell Line embryonic stem cell
47 chr1:214636800-214637200 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:214636800-214637200 Strong transcription Aorta Aorta
49 chr1:214636800-214637200 Enhancers Esophagus oesophagus
50 chr1:214636800-214637200 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015