The 2.0 version of rSNPBase

Variant report

Variant rs6689199
Chromosome Location chr1:214711761-214711762
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:214699800-214715200 Weak transcription Stomach Mucosa stomach
4 chr1:214701200-214719000 Weak transcription Hela-S3 cervix
5 chr1:214702800-214718800 Weak transcription Aorta Aorta
6 chr1:214703800-214711800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:214705600-214713000 Weak transcription Fetal Kidney kidney
8 chr1:214706600-214713600 Weak transcription H1 Cell Line embryonic stem cell
9 chr1:214706600-214713800 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:214706600-214714600 Weak transcription Lung lung
11 chr1:214706600-214715600 Weak transcription Esophagus oesophagus
12 chr1:214706600-214715600 Weak transcription Fetal Muscle Trunk muscle
13 chr1:214706600-214715600 Weak transcription Fetal Muscle Leg muscle
14 chr1:214706600-214715600 Weak transcription Left Ventricle heart
15 chr1:214706600-214715600 Weak transcription Ovary ovary
16 chr1:214706600-214720000 Weak transcription Fetal Intestine Small intestine
17 chr1:214706600-214720600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:214706800-214713200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:214706800-214713600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:214706800-214713600 Weak transcription NHLF lung
21 chr1:214706800-214713800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:214706800-214714600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:214706800-214715600 Weak transcription Gastric stomach
24 chr1:214706800-214715600 Weak transcription Pancreas Pancrea
25 chr1:214707000-214718200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:214710400-214711800 Enhancers A549 lung
27 chr1:214710400-214712200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:214710400-214712200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:214710400-214712200 Enhancers Adipose Nuclei Adipose
30 chr1:214710400-214712400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:214710400-214716800 Enhancers Skeletal Muscle Male skeletal muscle
32 chr1:214710600-214712000 Enhancers Skeletal Muscle Female skeletal muscle
33 chr1:214710600-214712200 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr1:214710600-214712400 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr1:214710600-214712400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:214710600-214712400 Enhancers Rectal Smooth Muscle rectum
37 chr1:214710600-214712400 Enhancers HMEC breast
38 chr1:214710600-214713400 Enhancers Fetal Lung lung
39 chr1:214710600-214713600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:214710600-214714000 Enhancers Fetal Heart heart
41 chr1:214710600-214714200 Enhancers NHDF-Ad bronchial
42 chr1:214710800-214712000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:214710800-214712000 Enhancers Right Ventricle heart
44 chr1:214710800-214712200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:214710800-214712200 Enhancers Muscle Satellite Cultured Cells --
46 chr1:214710800-214712600 Enhancers HUES48 Cell Line embryonic stem cell
47 chr1:214710800-214714200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:214710800-214714200 Enhancers Duodenum Smooth Muscle Duodenum
49 chr1:214710800-214718600 Weak transcription Right Atrium heart
50 chr1:214711000-214712200 Enhancers Fetal Stomach stomach

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Last update: Aug 31, 2015