Variant report

Variant rs17038109
Chromosome Location chr12:106485961-106485962
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:106458800-106500200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr12:106461800-106499600 Weak transcription Fetal Intestine Large intestine
3 chr12:106465200-106487000 Weak transcription Brain Germinal Matrix brain
4 chr12:106469000-106490200 Weak transcription Gastric stomach
5 chr12:106469000-106499400 Weak transcription Fetal Intestine Small intestine
6 chr12:106477000-106487200 Weak transcription HepG2 liver
7 chr12:106477600-106492200 Weak transcription Fetal Brain Female brain
8 chr12:106478400-106488400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr12:106478400-106491600 Weak transcription H9 Cell Line embryonic stem cell
10 chr12:106478600-106492400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr12:106478800-106487200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr12:106478800-106491000 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr12:106479000-106489000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr12:106479000-106490600 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr12:106479200-106487200 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr12:106479200-106490800 Weak transcription H1 Cell Line embryonic stem cell
17 chr12:106479200-106490800 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr12:106479200-106491400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr12:106479400-106487200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:106479400-106488400 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr12:106479400-106490800 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr12:106479800-106487000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr12:106481000-106493000 Enhancers Brain Inferior Temporal Lobe brain
24 chr12:106481600-106486200 Enhancers Stomach Smooth Muscle stomach
25 chr12:106482000-106489400 Enhancers Brain Cingulate Gyrus brain
26 chr12:106482800-106486400 Enhancers Left Ventricle heart
27 chr12:106483000-106486800 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr12:106483000-106489800 Weak transcription Liver Liver
29 chr12:106483200-106488000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr12:106483200-106490400 Weak transcription NHEK skin
31 chr12:106483800-106486400 Enhancers HUVEC blood vessel
32 chr12:106483800-106491800 Weak transcription Fetal Brain Male brain
33 chr12:106484000-106486200 Enhancers Fetal Heart heart
34 chr12:106484800-106486800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr12:106484800-106491800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr12:106485200-106487000 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr12:106485200-106491600 Enhancers Skeletal Muscle Male skeletal muscle
38 chr12:106485200-106500400 Weak transcription HMEC breast
39 chr12:106485400-106486400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr12:106485400-106487200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr12:106485400-106488400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr12:106485400-106488600 Weak transcription Fetal Muscle Trunk muscle
43 chr12:106485400-106489800 Weak transcription Fetal Stomach stomach
44 chr12:106485400-106490000 Weak transcription Fetal Lung lung
45 chr12:106485400-106490200 Weak transcription Pancreas Pancrea
46 chr12:106485400-106500800 Weak transcription Lung lung
47 chr12:106485600-106486000 Weak transcription Brain Angular Gyrus brain
48 chr12:106485600-106486000 Weak transcription Brain Anterior Caudate brain
49 chr12:106485600-106486400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr12:106485600-106486400 Weak transcription Adipose Nuclei Adipose

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