Variant report

Variant	rs17083355
Chromosome Location	chr4:54587964-54587965
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs17083326	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28459143	0.94[ASN][1000 genomes]
rs28484855	0.98[ASN][1000 genomes]
rs28589490	0.89[ASN][1000 genomes]
rs28613767	0.98[ASN][1000 genomes]
rs56753131	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60293431	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6844085	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs728587	0.98[ASN][1000 genomes]
rs7664385	0.82[ASN][1000 genomes]
rs7671090	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54584000-54600000	Weak transcription	Osteobl	bone
2	chr4:54587400-54588000	Enhancers	HSMMtube	muscle
3	chr4:54587400-54588200	Enhancers	HSMM	muscle
4	chr4:54587400-54588600	Enhancers	NHDF-Ad	bronchial
5	chr4:54587600-54588400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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