Variant report

Variant	rs17092544
Chromosome Location	chr12:43377050-43377051
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12317369	0.89[EUR][1000 genomes]
rs1520819	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1520826	0.94[AFR][1000 genomes]
rs17585302	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17585588	0.83[YRI][hapmap];0.83[AMR][1000 genomes]
rs2043552	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4768031	0.86[EUR][1000 genomes]
rs4768472	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7955263	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs7958072	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs7967110	0.94[AFR][1000 genomes]
rs7968365	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs7968724	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs7969311	0.81[AFR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:43368600-43379200	Weak transcription	Fetal Heart	heart
2	chr12:43373000-43377400	Enhancers	HSMMtube	muscle
3	chr12:43373200-43381200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr12:43374000-43381200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:43374200-43379400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr12:43374400-43377400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr12:43375200-43378800	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr12:43375600-43378800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr12:43375600-43378800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr12:43375600-43379000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr12:43375600-43379000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr12:43375800-43378800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr12:43375800-43378800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr12:43376000-43379000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
15	chr12:43376400-43379200	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr12:43376800-43378400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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