Variant report

Variant	rs17101774
Chromosome Location	chr14:64793581-64793582
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10136955	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs10137994	1.00[EUR][1000 genomes]
rs10140457	0.84[EUR][1000 genomes]
rs11844444	1.00[MEX][hapmap]
rs17101718	1.00[GIH][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.86[YRI][hapmap]
rs28485225	0.92[EUR][1000 genomes]
rs28499370	0.92[EUR][1000 genomes]
rs28663685	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3783735	0.85[EUR][1000 genomes]
rs59216189	0.92[EUR][1000 genomes]
rs7146908	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs73267889	1.00[EUR][1000 genomes]
rs73269927	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73269936	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902019	chr14:64395569-64882380	Enhancers Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64791200-64794000	Enhancers	Hela-S3	cervix
2	chr14:64792000-64803800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr14:64792000-64803800	Weak transcription	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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