Variant report

Variant	rs17108162
Chromosome Location	chr10:94844767-94844768
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12412418	0.89[AMR][1000 genomes]
rs1409384	0.81[AMR][1000 genomes]
rs17108155	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35800823	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4918000	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs61863117	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7905501	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs7905939	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94838200-94847400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr10:94840200-94845000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:94840400-94844800	Weak transcription	GM12878-XiMat	blood
4	chr10:94840600-94848200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:94840600-94849200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr10:94840800-94846600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr10:94840800-94846800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr10:94842000-94850600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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