The 2.0 version of rSNPBase

Variant report

Variant rs17111438
Chromosome Location chr1:94794033-94794034
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94787200-94795200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr1:94788600-94800800 Weak transcription Pancreas Pancrea
3 chr1:94790200-94796000 Enhancers HMEC breast
4 chr1:94790800-94799200 Enhancers Fetal Heart heart
5 chr1:94791200-94795800 Weak transcription Right Ventricle heart
6 chr1:94791200-94796600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:94791200-94798600 Weak transcription Lung lung
8 chr1:94791800-94794200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:94791800-94794600 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr1:94791800-94796200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:94792400-94800200 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:94792800-94796000 Enhancers A549 lung
13 chr1:94793000-94795000 Weak transcription HepG2 liver
14 chr1:94793000-94795800 Weak transcription Spleen Spleen
15 chr1:94793000-94796000 Weak transcription Brain Angular Gyrus brain
16 chr1:94793000-94796200 Enhancers HUVEC blood vessel
17 chr1:94793000-94798800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:94793200-94794800 Weak transcription Left Ventricle heart
19 chr1:94793200-94795200 Weak transcription Gastric stomach
20 chr1:94793200-94795400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr1:94793200-94795800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:94793200-94795800 Weak transcription Fetal Muscle Trunk muscle
23 chr1:94793200-94796000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:94793200-94796200 Enhancers Osteobl bone
25 chr1:94793200-94796600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:94793200-94798600 Weak transcription Fetal Muscle Leg muscle
27 chr1:94793200-94800600 Weak transcription H9 Cell Line embryonic stem cell
28 chr1:94793400-94794200 Enhancers HUES64 Cell Line embryonic stem cell
29 chr1:94793400-94794800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:94793400-94794800 Enhancers HSMM muscle
31 chr1:94793400-94795000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:94793400-94795000 Enhancers HSMMtube muscle
33 chr1:94793400-94795400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:94793400-94795400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr1:94793400-94795400 Weak transcription Fetal Stomach stomach
36 chr1:94793400-94795400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr1:94793400-94795800 Weak transcription Brain Anterior Caudate brain
38 chr1:94793400-94796200 Enhancers Muscle Satellite Cultured Cells --
39 chr1:94793400-94796400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:94793400-94798600 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:94793400-94798800 Weak transcription Placenta Placenta
42 chr1:94793600-94794400 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr1:94793600-94794600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:94793600-94796000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:94793800-94794800 Weak transcription Hela-S3 cervix
46 chr1:94793800-94795400 Weak transcription NHEK skin
47 chr1:94793800-94795600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:94793800-94795600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:94793800-94795600 Weak transcription NH-A brain
50 chr1:94793800-94796200 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015