Variant report

Variant	rs17111693
Chromosome Location	chr14:81768969-81768970
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:81768355..81770468-chr14:81790113..81792838,2	MCF-7	breast:
2	chr14:81687764..81689461-chr14:81767377..81769848,3	K562	blood:
3	chr14:81683859..81687307-chr14:81767803..81771525,4	MCF-7	breast:
4	chr14:81727868..81730785-chr14:81767384..81769125,2	MCF-7	breast:
5	chr14:81764831..81767906-chr14:81768128..81771132,3	K562	blood:
6	chr14:81760876..81762571-chr14:81768597..81770537,2	MCF-7	breast:
7	chr14:81768674..81769277-chr14:81919339..81919953,2	MCF-7	breast:
8	chr14:81768263..81770023-chr14:81899967..81902259,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000165417	Chromatin interaction

rs_ID	r²[population]
rs11849005	1.00[EUR][1000 genomes]
rs17111553	1.00[EUR][1000 genomes]
rs17111687	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17111721	1.00[EUR][1000 genomes]
rs7149494	1.00[EUR][1000 genomes]
rs7154235	1.00[EUR][1000 genomes]
rs8005247	1.00[EUR][1000 genomes]

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81743800-81778400	Weak transcription	Fetal Kidney	kidney
2	chr14:81745000-81769600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:81749800-81771400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr14:81754400-81777800	Weak transcription	Ovary	ovary
5	chr14:81755000-81769000	Weak transcription	Pancreas	Pancrea
6	chr14:81756600-81777400	Weak transcription	Fetal Muscle Leg	muscle
7	chr14:81759400-81773000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr14:81763200-81771600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr14:81763600-81769800	Weak transcription	Spleen	Spleen
10	chr14:81765600-81769800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr14:81767400-81770800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr14:81767400-81771200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr14:81767600-81769000	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr14:81767600-81770400	Enhancers	Skeletal Muscle Female	skeletal muscle
15	chr14:81767600-81770800	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr14:81767600-81771200	Enhancers	Primary monocytes fromperipheralblood	blood
17	chr14:81767800-81769000	Enhancers	Stomach Mucosa	stomach
18	chr14:81767800-81769200	Enhancers	Sigmoid Colon	Sigmoid Colon
19	chr14:81767800-81769400	Enhancers	Psoas Muscle	Psoas
20	chr14:81767800-81769400	Enhancers	HepG2	liver
21	chr14:81767800-81769800	Enhancers	Monocytes-CD14+_RO01746	blood
22	chr14:81767800-81770200	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr14:81767800-81770200	Enhancers	Primary hematopoietic stem cells	blood
24	chr14:81768000-81769600	Weak transcription	Brain Anterior Caudate	brain
25	chr14:81768000-81770600	Enhancers	Rectal Mucosa Donor 31	rectum
26	chr14:81768200-81770000	Enhancers	HMEC	breast
27	chr14:81768200-81770200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr14:81768200-81771200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr14:81768400-81769400	Enhancers	K562	blood
30	chr14:81768400-81769800	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr14:81768400-81769800	Enhancers	Fetal Intestine Small	intestine
32	chr14:81768400-81770000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr14:81768400-81770200	Genic enhancers	NHEK	skin
34	chr14:81768400-81770400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr14:81768400-81770400	Enhancers	Pancreatic Islets	Pancreatic Islet
36	chr14:81768400-81770400	Enhancers	Rectal Mucosa Donor 29	rectum
37	chr14:81768400-81771200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr14:81768400-81771200	Enhancers	Placenta	Placenta
39	chr14:81768400-81771400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
40	chr14:81768600-81770000	Enhancers	Gastric	stomach
41	chr14:81768600-81773200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr14:81768600-81776800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr14:81768800-81770000	Enhancers	Liver	Liver
44	chr14:81768800-81771000	Enhancers	Fetal Intestine Large	intestine

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