Variant report

Variant	rs17112418
Chromosome Location	chr5:151336749-151336750
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10052795	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10058060	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10072473	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10477005	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13361115	1.00[CEU][hapmap]
rs2216641	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28565939	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28579965	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28597369	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59369689	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6579914	1.00[ASN][1000 genomes]
rs6878033	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73794394	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151329800-151337400	Weak transcription	Fetal Muscle Leg	muscle
2	chr5:151333000-151338200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
3	chr5:151333400-151338000	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr5:151333600-151338000	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr5:151333800-151337800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
6	chr5:151333800-151338200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr5:151334000-151337800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr5:151334000-151338000	Enhancers	Primary T cells fromperipheralblood	blood
9	chr5:151334400-151337000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr5:151334400-151337800	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr5:151334600-151338000	Enhancers	Primary T helper naive cells from peripheral blood	blood
12	chr5:151334800-151337000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
13	chr5:151335000-151337800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr5:151335800-151338000	Enhancers	Primary T regulatory cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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