Variant report

Variant	rs17115051
Chromosome Location	chr1:85226440-85226441
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:85214466..85216211-chr1:85223596..85226485,2	K562	blood:
2	chr1:85220217..85223143-chr1:85225006..85227154,2	K562	blood:

rs_ID	r²[population]
rs11805789	1.00[ASN][1000 genomes]
rs17115047	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17117109	1.00[MEX][hapmap]
rs17377156	1.00[ASN][1000 genomes]
rs2025597	1.00[MEX][hapmap]
rs3768249	1.00[JPT][hapmap]
rs586403	1.00[MEX][hapmap]
rs6665333	1.00[TSI][hapmap]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85204200-85230400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:85216800-85230000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:85218200-85226800	Enhancers	Fetal Brain Male	brain
4	chr1:85223600-85228000	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:85224200-85229400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr1:85224200-85229400	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr1:85225000-85229600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr1:85225200-85229800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr1:85225400-85229600	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr1:85225400-85229600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr1:85225400-85229600	Weak transcription	HMEC	breast
12	chr1:85225800-85226600	Enhancers	Fetal Brain Female	brain
13	chr1:85225800-85228200	Weak transcription	Stomach Mucosa	stomach
14	chr1:85225800-85228400	Weak transcription	Fetal Heart	heart
15	chr1:85225800-85229400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr1:85225800-85229400	Weak transcription	Brain Anterior Caudate	brain
17	chr1:85225800-85230000	Weak transcription	Brain Cingulate Gyrus	brain
18	chr1:85225800-85233600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr1:85226000-85229600	Weak transcription	Brain Hippocampus Middle	brain
20	chr1:85226000-85230000	Weak transcription	Brain Inferior Temporal Lobe	brain
21	chr1:85226000-85230400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr1:85226200-85228600	Weak transcription	Brain Germinal Matrix	brain

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