Variant report
Variant | rs17122938 |
---|---|
Chromosome Location | chr1:62487431-62487432 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:62385000-62494200 | Weak transcription | Aorta | Aorta |
2 | chr1:62409200-62518600 | Weak transcription | Pancreas | Pancrea |
3 | chr1:62424200-62494200 | Weak transcription | Esophagus | oesophagus |
4 | chr1:62446600-62487600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
5 | chr1:62458800-62521400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
6 | chr1:62459000-62516000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
7 | chr1:62459000-62530600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
8 | chr1:62459200-62487800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
9 | chr1:62459200-62511200 | Weak transcription | Gastric | stomach |
10 | chr1:62459200-62550000 | Weak transcription | Primary T cells fromperipheralblood | blood |
11 | chr1:62459400-62493800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
12 | chr1:62459600-62494200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
13 | chr1:62460000-62499600 | Weak transcription | Fetal Intestine Large | intestine |
14 | chr1:62460000-62516400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
15 | chr1:62460000-62544600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
16 | chr1:62460200-62487600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
17 | chr1:62460200-62516000 | Weak transcription | HMEC | breast |
18 | chr1:62466400-62494200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
19 | chr1:62469000-62533600 | Weak transcription | Rectal Smooth Muscle | rectum |
20 | chr1:62469800-62488000 | Weak transcription | H1 Cell Line | embryonic stem cell |
21 | chr1:62473000-62488200 | Weak transcription | H9 Cell Line | embryonic stem cell |
22 | chr1:62474200-62518600 | Weak transcription | Primary T cells from cord blood | blood |
23 | chr1:62479000-62487600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
24 | chr1:62479400-62488200 | Weak transcription | Psoas Muscle | Psoas |
25 | chr1:62479400-62490200 | Weak transcription | Left Ventricle | heart |
26 | chr1:62479400-62490200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
27 | chr1:62479400-62493600 | Weak transcription | Stomach Smooth Muscle | stomach |
28 | chr1:62479400-62496000 | Weak transcription | Fetal Kidney | kidney |
29 | chr1:62479600-62488000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
30 | chr1:62480600-62513000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
31 | chr1:62482800-62488000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
32 | chr1:62483400-62488400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
33 | chr1:62484400-62492800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
34 | chr1:62484400-62523000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
35 | chr1:62484400-62562200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
36 | chr1:62484600-62492400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
37 | chr1:62484600-62493800 | Weak transcription | Duodenum Mucosa | Duodenum |
38 | chr1:62484600-62494400 | Weak transcription | Liver | Liver |
39 | chr1:62484600-62506000 | Weak transcription | NHEK | skin |
40 | chr1:62484800-62511200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
41 | chr1:62485000-62494000 | Weak transcription | Fetal Intestine Small | intestine |
42 | chr1:62485200-62487600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
43 | chr1:62485600-62488400 | Strong transcription | Ovary | ovary |
44 | chr1:62486000-62492600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
45 | chr1:62486200-62517600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
46 | chr1:62487000-62488600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
47 | chr1:62487400-62488400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |