The 2.0 version of rSNPBase

Variant report

Variant rs17127904
Chromosome Location chr1:86034782-86034783
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86011600-86035200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:86032800-86034800 Genic enhancers HSMM muscle
3 chr1:86032800-86042000 Weak transcription Left Ventricle heart
4 chr1:86033200-86034800 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:86033200-86035000 Genic enhancers Osteobl bone
6 chr1:86033200-86038200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:86033400-86037400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:86033800-86037800 Enhancers Rectal Smooth Muscle rectum
9 chr1:86034000-86037000 Enhancers NHLF lung
10 chr1:86034000-86037200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:86034000-86037400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:86034000-86037600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:86034000-86037600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:86034000-86038000 Enhancers Aorta Aorta
15 chr1:86034000-86038000 Enhancers NHEK skin
16 chr1:86034000-86041800 Enhancers HMEC breast
17 chr1:86034200-86035000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:86034200-86035000 Genic enhancers NHDF-Ad bronchial
19 chr1:86034200-86035800 Enhancers Colon Smooth Muscle Colon
20 chr1:86034200-86038000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:86034400-86034800 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:86034400-86034800 Enhancers Right Ventricle heart
23 chr1:86034400-86034800 Flanking Active TSS NH-A brain
24 chr1:86034400-86035000 Flanking Active TSS Muscle Satellite Cultured Cells --
25 chr1:86034400-86035600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:86034400-86035800 Enhancers Placenta Amnion Placenta Amnion
27 chr1:86034400-86036400 Enhancers Stomach Smooth Muscle stomach
28 chr1:86034400-86036600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:86034400-86037800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:86034600-86034800 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr1:86034600-86034800 Flanking Active TSS HSMMtube muscle
32 chr1:86034600-86034800 Flanking Active TSS HUVEC blood vessel
33 chr1:86034600-86035000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:86034600-86035200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:86034600-86035600 Weak transcription Fetal Kidney kidney
36 chr1:86034600-86035800 Enhancers HUES6 Cell Line embryonic stem cell
37 chr1:86034600-86036000 Enhancers Fetal Stomach stomach
38 chr1:86034600-86036200 Weak transcription A549 lung
39 chr1:86034600-86036600 Enhancers Fetal Heart heart
40 chr1:86034600-86041400 Weak transcription Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015