Variant report

Variant rs17140135
Chromosome Location chr5:115901192-115901193
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115890600-115907800 Weak transcription Spleen Spleen
2 chr5:115890800-115907600 Weak transcription Colonic Mucosa Colon
3 chr5:115891000-115907600 Weak transcription Ovary ovary
4 chr5:115891200-115904600 Weak transcription Fetal Stomach stomach
5 chr5:115891400-115905200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:115893800-115902400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr5:115894400-115902600 Enhancers Brain Substantia Nigra brain
8 chr5:115895600-115901400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr5:115895800-115902400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr5:115896000-115904800 Weak transcription Duodenum Mucosa Duodenum
11 chr5:115896000-115905000 Weak transcription Psoas Muscle Psoas
12 chr5:115896000-115905200 Weak transcription Lung lung
13 chr5:115896000-115907600 Weak transcription Fetal Muscle Trunk muscle
14 chr5:115896400-115904200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:115896600-115905800 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr5:115897200-115909800 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
17 chr5:115898000-115903600 Enhancers Brain Angular Gyrus brain
18 chr5:115898400-115902600 Enhancers H1 Cell Line embryonic stem cell
19 chr5:115898400-115907400 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr5:115898600-115905200 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr5:115898800-115902200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:115898800-115902200 Enhancers Fetal Brain Female brain
23 chr5:115898800-115902400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr5:115898800-115902400 Weak transcription Left Ventricle heart
25 chr5:115898800-115904200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr5:115898800-115904400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr5:115899000-115901200 Weak transcription Primary hematopoietic stem cells blood
28 chr5:115899000-115902600 Enhancers Cortex derived primary cultured neurospheres brain
29 chr5:115899200-115901800 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr5:115899400-115902000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr5:115899400-115903200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr5:115899600-115902000 Enhancers Fetal Muscle Leg muscle
33 chr5:115899600-115902800 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
34 chr5:115899800-115901400 Weak transcription Brain Germinal Matrix brain
35 chr5:115899800-115902600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr5:115899800-115903600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr5:115900000-115901400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr5:115900000-115904000 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr5:115900200-115901400 Enhancers Small Intestine intestine
40 chr5:115900200-115907400 Weak transcription Colon Smooth Muscle Colon
41 chr5:115900400-115901200 Enhancers HUES48 Cell Line embryonic stem cell
42 chr5:115900400-115901200 Enhancers Adipose Nuclei Adipose
43 chr5:115900400-115901400 Weak transcription Fetal Intestine Small intestine
44 chr5:115900400-115901800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr5:115900600-115901400 Flanking Active TSS Brain Inferior Temporal Lobe brain
46 chr5:115900600-115903000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr5:115900600-115907000 Weak transcription Stomach Smooth Muscle stomach
48 chr5:115900800-115901200 Genic enhancers iPS-18 Cell Line embryonic stem cell
49 chr5:115900800-115901200 Flanking Active TSS Brain Cingulate Gyrus brain
50 chr5:115900800-115901200 Weak transcription Fetal Kidney kidney

Quick Search:


  
Input of quick search could be:

what's new

Quick links