Variant report
| Variant | rs171457 |
|---|---|
| Chromosome Location | chr14:63305545-63305546 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:11)
| rs_ID | r2[population] |
|---|---|
| rs12431729 | 0.84[CEU][hapmap] |
| rs1956016 | 0.87[CEU][hapmap];0.86[YRI][hapmap] |
| rs243145 | 0.81[LWK][hapmap];0.88[MKK][hapmap] |
| rs243146 | 0.86[CHB][hapmap];0.81[CHD][hapmap] |
| rs243147 | 0.81[LWK][hapmap];0.88[MKK][hapmap] |
| rs243148 | 0.87[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap] |
| rs243155 | 0.81[EUR][1000 genomes] |
| rs243156 | 0.84[GIH][hapmap];0.80[EUR][1000 genomes] |
| rs243157 | 0.81[EUR][1000 genomes] |
| rs7155426 | 0.82[CEU][hapmap];0.84[CHB][hapmap] |
| rs8012941 | 0.84[TSI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv902015 | chr14:63261862-63356253 | Enhancers Weak transcription ZNF genes & repeats Strong transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
