Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11158459	0.90[CHB][hapmap]
rs11623063	0.82[CHB][hapmap]
rs11625796	0.83[CHB][hapmap];0.88[CHD][hapmap]
rs11846438	0.88[CEU][hapmap];1.00[CHB][hapmap]
rs12431704	0.82[CHB][hapmap]
rs12431729	0.92[CEU][hapmap];0.85[TSI][hapmap];0.87[EUR][1000 genomes]
rs12883703	0.84[CEU][hapmap]
rs171457	0.84[GIH][hapmap]
rs1956016	0.91[CEU][hapmap]
rs1956027	0.83[CHD][hapmap]
rs1980561	0.84[CEU][hapmap]
rs243146	1.00[CEU][hapmap];0.87[GIH][hapmap];0.81[JPT][hapmap];0.89[MEX][hapmap];0.92[TSI][hapmap]
rs243148	0.92[CEU][hapmap]
rs243149	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[GIH][hapmap];0.81[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap]
rs243155	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs243157	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs243159	1.00[CEU][hapmap]
rs243162	1.00[CEU][hapmap];0.89[MEX][hapmap];0.95[TSI][hapmap]
rs4146434	0.83[CHB][hapmap];0.86[CHD][hapmap]
rs4146435	0.83[CHB][hapmap]
rs7155227	0.83[CHB][hapmap]
rs7155426	1.00[CEU][hapmap];0.84[JPT][hapmap]
rs7155469	0.83[CHB][hapmap];0.85[CHD][hapmap]
rs7156354	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs8012941	0.84[CEU][hapmap]
rs8021413	0.83[CEU][hapmap]
rs9972116	0.82[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902015	chr14:63261862-63356253	Enhancers Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs243156	SYT16	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63295200-63296400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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