Variant report

Variant	rs9972116
Chromosome Location	chr14:63376204-63376205
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10134985	0.96[CEU][hapmap]
rs10483762	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs10873164	0.96[CEU][hapmap]
rs11158459	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11623063	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11625796	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11628836	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs11846438	0.82[CHB][hapmap]
rs12431704	0.96[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12588293	0.96[CEU][hapmap]
rs12881527	1.00[CEU][hapmap];0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs12881682	0.89[CEU][hapmap];0.81[JPT][hapmap]
rs1950572	0.96[CEU][hapmap]
rs1956024	0.96[CEU][hapmap]
rs1956027	0.89[CEU][hapmap];0.85[CHB][hapmap];0.90[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2144775	0.89[CEU][hapmap]
rs2356098	0.85[EUR][1000 genomes]
rs243155	0.82[CHB][hapmap]
rs243156	0.82[CHB][hapmap]
rs243157	0.82[CHB][hapmap]
rs4146434	1.00[CHB][hapmap];0.81[JPT][hapmap];0.83[ASN][1000 genomes]
rs4146435	1.00[CHB][hapmap];0.82[JPT][hapmap];0.83[ASN][1000 genomes]
rs6573462	0.96[CEU][hapmap]
rs6573466	0.96[CEU][hapmap]
rs6573467	0.96[CEU][hapmap];0.92[EUR][1000 genomes]
rs7155227	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7155469	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7156354	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8015097	0.96[CEU][hapmap]
rs8019236	0.96[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042953	chr14:63314591-63384260	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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