Variant report

Variant	rs8015097
Chromosome Location	chr14:63361863-63361864
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 88 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs10047851	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10047852	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10047856	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10047884	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10047938	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10130817	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10134277	0.97[ASN][1000 genomes]
rs10134985	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10135128	0.95[CHB][hapmap];0.87[JPT][hapmap]
rs10135421	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10135862	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs10136167	0.90[CHB][hapmap]
rs10138498	0.90[CHB][hapmap]
rs10139105	0.90[CHB][hapmap]
rs10139268	0.90[CHB][hapmap];0.80[JPT][hapmap]
rs10139468	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10140008	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10143260	0.94[ASN][1000 genomes]
rs10143966	0.97[ASN][1000 genomes]
rs10146526	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10146879	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs10147931	0.90[CHB][hapmap]
rs10148076	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10151264	0.99[ASN][1000 genomes]
rs10483757	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10483758	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10483759	1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs10483762	0.93[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.85[ASN][1000 genomes]
rs10873163	0.90[CHB][hapmap]
rs10873164	0.93[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap]
rs10873165	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs11158459	0.92[CEU][hapmap];0.86[YRI][hapmap]
rs11623063	0.93[CEU][hapmap]
rs11625796	0.96[CEU][hapmap]
rs11628836	0.93[CEU][hapmap]
rs12100661	0.85[CHB][hapmap]
rs12147279	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12431704	1.00[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs12586807	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs12587225	0.95[CHB][hapmap];0.83[ASN][1000 genomes]
rs12587258	0.95[CHB][hapmap];0.83[ASN][1000 genomes]
rs12588293	0.93[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap]
rs12588552	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12588586	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12881527	0.96[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12881682	0.85[CEU][hapmap]
rs1543437	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs17100446	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs17100497	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17223580	1.00[CHB][hapmap];0.91[JPT][hapmap];0.94[ASN][1000 genomes]
rs17223846	1.00[CHB][hapmap]
rs17823609	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs17823627	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17823807	1.00[CHB][hapmap]
rs1950568	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs1950572	0.93[CEU][hapmap]
rs1956018	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs1956024	0.93[CEU][hapmap]
rs1956027	0.92[CEU][hapmap];0.91[YRI][hapmap];0.88[EUR][1000 genomes]
rs2144775	0.86[CEU][hapmap];0.97[ASN][1000 genomes]
rs2355741	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs2860089	0.90[CHB][hapmap]
rs41419249	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs4270090	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs4899096	0.90[CHB][hapmap];0.81[JPT][hapmap]
rs4899100	1.00[CHB][hapmap];0.95[JPT][hapmap];0.99[ASN][1000 genomes]
rs4902191	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs4902192	0.90[CHB][hapmap]
rs4902193	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs57087381	0.91[ASN][1000 genomes]
rs59454582	0.91[ASN][1000 genomes]
rs6573462	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs6573466	0.93[CEU][hapmap]
rs6573467	0.93[CEU][hapmap]
rs7146868	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7155227	0.93[CEU][hapmap]
rs7155469	0.96[CEU][hapmap]
rs7156354	0.96[CEU][hapmap]
rs8004918	1.00[CHB][hapmap]
rs8005915	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8013931	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8019236	0.93[CEU][hapmap];0.90[CHB][hapmap]
rs9323421	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs9323422	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs9888566	1.00[CHB][hapmap];0.86[JPT][hapmap];0.83[YRI][hapmap]
rs9888605	1.00[CHB][hapmap];0.87[JPT][hapmap];0.81[YRI][hapmap]
rs9972116	0.96[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042953	chr14:63314591-63384260	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63356800-63362400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr14:63361000-63362800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links