Variant report

Variant	rs17823807
Chromosome Location	chr14:63385109-63385110
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 81 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:81)

rs_ID	r²[population]
rs10047851	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10047852	0.92[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap]
rs10047856	0.92[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap]
rs10047884	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10047938	0.92[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap]
rs10130817	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10134277	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10134985	1.00[CHB][hapmap]
rs10135128	0.92[CEU][hapmap];0.94[CHB][hapmap];0.87[JPT][hapmap]
rs10135421	0.92[CEU][hapmap];1.00[CHB][hapmap]
rs10135862	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap]
rs10136167	0.91[CEU][hapmap];0.90[CHB][hapmap];0.80[JPT][hapmap]
rs10138498	0.92[CEU][hapmap];0.90[CHB][hapmap]
rs10139105	0.90[CEU][hapmap];0.90[CHB][hapmap]
rs10139268	0.91[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap]
rs10139468	0.92[CEU][hapmap];0.90[CHB][hapmap];0.81[JPT][hapmap]
rs10140008	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10143260	0.84[ASN][1000 genomes]
rs10143966	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10146526	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10146673	0.92[CEU][hapmap]
rs10146879	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap]
rs10147931	0.91[CEU][hapmap];0.90[CHB][hapmap]
rs10148076	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10151264	0.84[ASN][1000 genomes]
rs10483757	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs10483758	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs10483759	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10483760	1.00[CEU][hapmap];0.83[JPT][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10483762	1.00[CHB][hapmap];0.87[JPT][hapmap];0.95[ASN][1000 genomes]
rs10873163	0.91[CEU][hapmap];0.90[CHB][hapmap]
rs10873164	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs10873165	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap]
rs12100661	0.92[CEU][hapmap];0.85[CHB][hapmap]
rs12147279	0.86[CEU][hapmap];1.00[CHB][hapmap]
rs12586807	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs12587225	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12587258	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12588293	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs12588552	1.00[CHB][hapmap]
rs12588586	0.86[CEU][hapmap];1.00[CHB][hapmap]
rs12589408	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12881527	1.00[CHB][hapmap];0.87[JPT][hapmap];0.92[ASN][1000 genomes]
rs1543437	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs17100446	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17100497	0.86[CEU][hapmap];1.00[CHB][hapmap]
rs17223580	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17223818	1.00[CEU][hapmap];0.84[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17223839	1.00[CEU][hapmap];0.83[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17223846	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs17823609	0.92[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.84[ASN][1000 genomes]
rs17823627	1.00[CHB][hapmap]
rs1950568	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs1956018	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs1956026	1.00[CEU][hapmap]
rs2144775	0.85[ASN][1000 genomes]
rs2355741	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs2860089	0.92[CEU][hapmap];0.90[CHB][hapmap]
rs41419249	0.92[CEU][hapmap];0.89[CHB][hapmap];0.81[JPT][hapmap]
rs4146434	1.00[CEU][hapmap]
rs4146435	1.00[CEU][hapmap]
rs4270090	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs4899096	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs4899100	0.92[CEU][hapmap];1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs4902191	0.92[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap]
rs4902192	1.00[CEU][hapmap];0.94[CHB][hapmap]
rs4902193	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs57087381	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59454582	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6573462	1.00[CHB][hapmap]
rs7146868	0.85[CEU][hapmap];1.00[CHB][hapmap]
rs8004918	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8005915	1.00[CHB][hapmap]
rs8007782	1.00[CEU][hapmap];0.84[JPT][hapmap]
rs8013931	0.86[CEU][hapmap];1.00[CHB][hapmap]
rs8015097	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs8019236	0.89[CHB][hapmap]
rs9323421	0.91[CEU][hapmap];0.89[CHB][hapmap];0.86[JPT][hapmap]
rs9323422	0.92[CEU][hapmap];0.90[CHB][hapmap];0.82[JPT][hapmap]
rs9888566	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs9888605	0.92[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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