Variant report

Variant	rs10483760
Chromosome Location	chr14:63383834-63383835
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 72 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:71)

rs_ID	r²[population]
rs10047851	0.92[CEU][hapmap]
rs10047852	0.92[CEU][hapmap]
rs10047856	0.92[CEU][hapmap]
rs10047884	0.92[CEU][hapmap]
rs10047938	0.92[CEU][hapmap]
rs10130817	0.92[CEU][hapmap]
rs10134277	0.82[EUR][1000 genomes]
rs10135128	0.92[CEU][hapmap]
rs10135421	0.92[CEU][hapmap]
rs10135862	1.00[CEU][hapmap]
rs10136167	0.91[CEU][hapmap]
rs10138498	0.92[CEU][hapmap]
rs10139105	0.90[CEU][hapmap]
rs10139268	0.91[CEU][hapmap]
rs10139468	0.92[CEU][hapmap]
rs10140008	0.92[CEU][hapmap]
rs10143966	0.82[EUR][1000 genomes]
rs10146526	0.92[CEU][hapmap]
rs10146673	0.92[CEU][hapmap]
rs10146879	1.00[CEU][hapmap]
rs10147931	0.91[CEU][hapmap]
rs10148076	0.92[CEU][hapmap]
rs10483757	0.92[CEU][hapmap]
rs10483759	1.00[CEU][hapmap];0.82[JPT][hapmap];0.93[EUR][1000 genomes]
rs10873163	0.91[CEU][hapmap]
rs10873165	1.00[CEU][hapmap]
rs11628836	0.86[CHB][hapmap];0.87[JPT][hapmap];0.91[ASN][1000 genomes]
rs12100661	0.92[CEU][hapmap]
rs12147279	0.85[CEU][hapmap]
rs12586807	1.00[CEU][hapmap]
rs12587225	1.00[CEU][hapmap];0.87[GIH][hapmap];0.83[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12587258	1.00[CEU][hapmap];0.83[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12588586	0.85[CEU][hapmap]
rs12589408	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.87[JPT][hapmap];1.00[LWK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1543437	1.00[CEU][hapmap]
rs17100446	0.92[CEU][hapmap]
rs17100497	0.85[CEU][hapmap]
rs17223580	0.92[CEU][hapmap]
rs17223818	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17223839	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17223846	1.00[CEU][hapmap];0.83[JPT][hapmap]
rs17823609	0.92[CEU][hapmap]
rs17823807	1.00[CEU][hapmap];0.83[JPT][hapmap]
rs1950568	0.92[CEU][hapmap]
rs1950572	0.80[CHB][hapmap];0.86[JPT][hapmap]
rs1956018	0.92[CEU][hapmap]
rs1956024	0.81[CHB][hapmap]
rs1956026	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs2356098	0.82[ASN][1000 genomes]
rs2860089	0.92[CEU][hapmap]
rs41419249	0.92[CEU][hapmap]
rs4146434	1.00[CEU][hapmap]
rs4146435	1.00[CEU][hapmap]
rs4270090	1.00[CEU][hapmap]
rs4899096	0.92[CEU][hapmap]
rs4899100	0.92[CEU][hapmap]
rs4902191	0.92[CEU][hapmap]
rs4902192	1.00[CEU][hapmap]
rs4902193	1.00[CEU][hapmap]
rs57087381	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs59454582	0.96[EUR][1000 genomes]
rs6573466	0.86[CHB][hapmap];0.87[JPT][hapmap]
rs7146868	0.85[CEU][hapmap]
rs8004918	1.00[CEU][hapmap];0.85[JPT][hapmap]
rs8007782	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs8013931	0.85[CEU][hapmap]
rs8019236	0.85[CHB][hapmap];0.87[JPT][hapmap]
rs9323421	0.91[CEU][hapmap]
rs9323422	0.92[CEU][hapmap]
rs9888566	0.92[CEU][hapmap]
rs9888605	0.92[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042953	chr14:63314591-63384260	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63383000-63384600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr14:63383200-63384200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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