Variant report
| Variant | rs10146673 |
|---|---|
| Chromosome Location | chr14:63308198-63308199 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:64)
| rs_ID | r2[population] |
|---|---|
| rs10047851 | 1.00[CEU][hapmap] |
| rs10047852 | 1.00[CEU][hapmap] |
| rs10047856 | 1.00[CEU][hapmap] |
| rs10047884 | 1.00[CEU][hapmap] |
| rs10047938 | 1.00[CEU][hapmap] |
| rs10130817 | 1.00[CEU][hapmap] |
| rs10134277 | 0.85[EUR][1000 genomes] |
| rs10135128 | 1.00[CEU][hapmap] |
| rs10135421 | 0.85[CEU][hapmap] |
| rs10135862 | 0.92[CEU][hapmap] |
| rs10136167 | 1.00[CEU][hapmap] |
| rs10138498 | 1.00[CEU][hapmap] |
| rs10139105 | 1.00[CEU][hapmap] |
| rs10139268 | 1.00[CEU][hapmap] |
| rs10139468 | 1.00[CEU][hapmap] |
| rs10140008 | 1.00[CEU][hapmap] |
| rs10143260 | 0.89[EUR][1000 genomes];0.80[ASN][1000 genomes] |
| rs10143966 | 0.85[EUR][1000 genomes] |
| rs10146526 | 1.00[CEU][hapmap] |
| rs10146879 | 0.92[CEU][hapmap] |
| rs10147931 | 1.00[CEU][hapmap] |
| rs10148076 | 1.00[CEU][hapmap] |
| rs10483757 | 1.00[CEU][hapmap] |
| rs10483758 | 0.84[CEU][hapmap] |
| rs10483759 | 0.92[CEU][hapmap] |
| rs10483760 | 0.92[CEU][hapmap] |
| rs10873163 | 1.00[CEU][hapmap] |
| rs10873165 | 0.92[CEU][hapmap] |
| rs12100661 | 1.00[CEU][hapmap] |
| rs12586807 | 0.92[CEU][hapmap] |
| rs12587225 | 0.92[CEU][hapmap] |
| rs12587258 | 0.92[CEU][hapmap] |
| rs12589408 | 0.92[CEU][hapmap] |
| rs1543437 | 0.92[CEU][hapmap] |
| rs17100446 | 1.00[CEU][hapmap] |
| rs17223580 | 1.00[CEU][hapmap];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes] |
| rs17223818 | 0.92[CEU][hapmap] |
| rs17223839 | 0.92[CEU][hapmap] |
| rs17223846 | 0.92[CEU][hapmap] |
| rs17823609 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes] |
| rs17823627 | 0.85[CEU][hapmap] |
| rs17823807 | 0.92[CEU][hapmap] |
| rs1950568 | 1.00[CEU][hapmap] |
| rs1956018 | 1.00[CEU][hapmap] |
| rs1956026 | 0.92[CEU][hapmap] |
| rs2355741 | 0.84[CEU][hapmap] |
| rs243163 | 0.85[CEU][hapmap] |
| rs2860089 | 1.00[CEU][hapmap] |
| rs41419249 | 1.00[CEU][hapmap] |
| rs4146434 | 0.92[CEU][hapmap] |
| rs4146435 | 0.92[CEU][hapmap] |
| rs4270090 | 0.92[CEU][hapmap] |
| rs4899096 | 1.00[CEU][hapmap] |
| rs4899100 | 0.84[CEU][hapmap] |
| rs4902191 | 1.00[CEU][hapmap] |
| rs4902192 | 0.92[CEU][hapmap] |
| rs4902193 | 0.92[CEU][hapmap] |
| rs8004918 | 0.91[CEU][hapmap] |
| rs8005915 | 0.84[CEU][hapmap] |
| rs8007782 | 0.92[CEU][hapmap] |
| rs9323421 | 1.00[CEU][hapmap] |
| rs9323422 | 1.00[CEU][hapmap] |
| rs9888566 | 1.00[CEU][hapmap] |
| rs9888605 | 1.00[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv902015 | chr14:63261862-63356253 | Enhancers Weak transcription ZNF genes & repeats Strong transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
