Variant report

Variant	rs59454582
Chromosome Location	chr14:63368552-63368553
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10134277	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10143260	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10143966	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10151264	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10483759	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10483760	0.96[EUR][1000 genomes]
rs10483762	0.87[ASN][1000 genomes]
rs12587225	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12587258	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12589408	0.93[EUR][1000 genomes]
rs12881527	0.93[ASN][1000 genomes]
rs17223580	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17223818	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17223839	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17823609	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2144775	0.92[ASN][1000 genomes]
rs4899100	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs57087381	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8015097	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042953	chr14:63314591-63384260	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63364000-63369200	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr14:63367800-63368800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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