Variant report
| Variant | rs8021413 |
|---|---|
| Chromosome Location | chr14:63318277-63318278 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr14:63316604..63319263-chr14:63330704..63332939,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:11)
| rs_ID | r2[population] |
|---|---|
| rs1956016 | 0.92[CEU][hapmap];0.84[JPT][hapmap] |
| rs243146 | 0.83[CEU][hapmap] |
| rs243148 | 0.92[CEU][hapmap] |
| rs243149 | 0.83[CEU][hapmap] |
| rs243155 | 0.84[CEU][hapmap] |
| rs243156 | 0.83[CEU][hapmap] |
| rs243157 | 0.84[CEU][hapmap] |
| rs243159 | 0.84[CEU][hapmap] |
| rs243162 | 0.83[CEU][hapmap] |
| rs7155426 | 0.83[CEU][hapmap] |
| rs8012941 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv902015 | chr14:63261862-63356253 | Enhancers Weak transcription ZNF genes & repeats Strong transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 2 | nsv1042953 | chr14:63314591-63384260 | Enhancers Weak transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
