Variant report

Variant	rs17148990
Chromosome Location	chr11:86073216-86073217
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1118332	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11824987	1.00[CEU][hapmap]
rs7105138	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7114910	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs73515992	0.88[ASN][1000 genomes]
rs73517905	0.97[ASN][1000 genomes]
rs73517915	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73517917	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7925989	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7942577	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:86067000-86074600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:86067000-86081200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr11:86072600-86075600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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