Variant report

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10226211	0.94[EUR][1000 genomes]
rs10226348	0.94[EUR][1000 genomes]
rs10238735	0.83[ASN][1000 genomes]
rs10240374	0.94[EUR][1000 genomes]
rs10256041	0.86[EUR][1000 genomes]
rs10271775	0.86[EUR][1000 genomes]
rs10281909	0.94[EUR][1000 genomes]
rs11525793	0.86[ASN][1000 genomes]
rs11526192	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11763353	0.89[EUR][1000 genomes]
rs11764580	0.86[EUR][1000 genomes]
rs12672203	0.86[JPT][hapmap]
rs12699743	0.95[EUR][1000 genomes]
rs12699744	0.95[EUR][1000 genomes]
rs12699745	0.92[EUR][1000 genomes]
rs12699746	0.95[EUR][1000 genomes]
rs13227733	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13232530	0.95[EUR][1000 genomes]
rs13234532	0.93[AMR][1000 genomes]
rs17168852	0.91[ASN][1000 genomes]
rs17168861	0.92[ASN][1000 genomes]
rs17168892	0.95[EUR][1000 genomes]
rs17168895	0.80[EUR][1000 genomes]
rs34067265	0.95[EUR][1000 genomes]
rs36006886	0.95[EUR][1000 genomes]
rs36125507	0.80[EUR][1000 genomes]
rs59778229	0.83[ASN][1000 genomes]
rs6461191	0.86[EUR][1000 genomes]
rs6461201	0.82[JPT][hapmap]
rs67307027	0.90[ASN][1000 genomes]
rs6949770	0.86[EUR][1000 genomes]
rs6954772	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6964583	0.92[ASN][1000 genomes]
rs6967149	0.95[EUR][1000 genomes]
rs6968582	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71540711	0.86[EUR][1000 genomes]
rs7788105	0.94[EUR][1000 genomes]
rs7791533	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932168	chr7:15573437-15895294	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv523199	chr7:15582208-16042596	Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	nsv887735	chr7:15625992-15698178	Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:15630200-15648800	Weak transcription	Fetal Lung	lung
2	chr7:15640000-15651200	Weak transcription	Adipose Nuclei	Adipose
3	chr7:15640000-15662400	Weak transcription	Fetal Muscle Leg	muscle
4	chr7:15640000-15663800	Weak transcription	Fetal Muscle Trunk	muscle

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