Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:40597862..40599690-chr7:40606345..40608569,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10278801	1.00[JPT][hapmap]
rs12534250	1.00[JPT][hapmap]
rs12666860	1.00[JPT][hapmap]
rs1304795	1.00[JPT][hapmap]
rs16880235	1.00[JPT][hapmap]
rs16880239	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17171713	1.00[JPT][hapmap]
rs17171724	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17171729	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17171732	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17171738	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17171751	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17171752	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1859706	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2024014	1.00[JPT][hapmap]
rs2051919	1.00[JPT][hapmap]
rs2108189	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2329776	1.00[JPT][hapmap]
rs3779136	1.00[JPT][hapmap]
rs4720371	1.00[JPT][hapmap]
rs4723967	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4723972	1.00[CHB][hapmap]
rs6947887	1.00[JPT][hapmap]
rs6957636	1.00[JPT][hapmap]
rs6965918	1.00[JPT][hapmap]
rs6977104	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7776976	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7784279	1.00[JPT][hapmap]
rs7789681	1.00[JPT][hapmap]
rs7809620	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030648	chr7:40218618-41032599	Flanking Active TSS Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1030515	chr7:40501867-40634808	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv887987	chr7:40505382-40748650	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv830971	chr7:40523075-40700172	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:40596000-40608400	Weak transcription	Aorta	Aorta
2	chr7:40603200-40609600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr7:40604800-40608200	Enhancers	Fetal Heart	heart
4	chr7:40606600-40607200	Flanking Active TSS	Dnd41	blood
5	chr7:40606800-40607200	Enhancers	Thymus	Thymus

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