Variant report

Variant rs17191181
Chromosome Location chr6:31171876-31171877
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31166200-31172400 Weak transcription Gastric stomach
2 chr6:31169600-31172800 Flanking Active TSS Primary B cells from cord blood blood
3 chr6:31169600-31173000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr6:31169800-31172200 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr6:31169800-31173000 Enhancers Sigmoid Colon Sigmoid Colon
6 chr6:31170000-31172200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr6:31170000-31172200 Enhancers HUES6 Cell Line embryonic stem cell
8 chr6:31170000-31172200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr6:31170000-31172200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr6:31170000-31172200 Flanking Active TSS Duodenum Mucosa Duodenum
11 chr6:31170000-31172200 Flanking Active TSS NHEK skin
12 chr6:31170000-31172800 Active TSS Rectal Smooth Muscle rectum
13 chr6:31170200-31172000 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr6:31170200-31172200 Enhancers HUES64 Cell Line embryonic stem cell
15 chr6:31170200-31172200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
16 chr6:31170200-31173000 Enhancers Small Intestine intestine
17 chr6:31170600-31172000 Enhancers Cortex derived primary cultured neurospheres brain
18 chr6:31170600-31172200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr6:31170600-31173200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
20 chr6:31170800-31172000 Enhancers ES-WA7 Cell Line embryonic stem cell
21 chr6:31170800-31172200 Active TSS Brain Hippocampus Middle brain
22 chr6:31170800-31183000 Weak transcription Spleen Spleen
23 chr6:31171000-31172200 Flanking Active TSS Muscle Satellite Cultured Cells --
24 chr6:31171000-31172200 Active TSS Colonic Mucosa Colon
25 chr6:31171000-31172800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:31171200-31172000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
27 chr6:31171200-31172200 Flanking Active TSS Primary B cells from peripheral blood blood
28 chr6:31171200-31172200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:31171200-31172200 Flanking Active TSS HepG2 liver
30 chr6:31171200-31172200 Flanking Active TSS HMEC breast
31 chr6:31171200-31172200 Flanking Active TSS HUVEC blood vessel
32 chr6:31171200-31172200 Flanking Active TSS K562 blood
33 chr6:31171200-31172400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
34 chr6:31171200-31172800 Flanking Active TSS HSMMtube muscle
35 chr6:31171400-31172000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
36 chr6:31171400-31172000 Flanking Active TSS Stomach Mucosa stomach
37 chr6:31171400-31172200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr6:31171400-31172200 Flanking Active TSS Fetal Intestine Small intestine
39 chr6:31171400-31172200 Flanking Active TSS Fetal Thymus thymus
40 chr6:31171400-31172200 Enhancers Left Ventricle heart
41 chr6:31171400-31172200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
42 chr6:31171400-31172400 Active TSS Stomach Smooth Muscle stomach
43 chr6:31171400-31172600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
44 chr6:31171600-31172000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:31171600-31172000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
46 chr6:31171600-31172000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:31171600-31172000 Active TSS Primary T killer naive cells fromperipheralblood blood
48 chr6:31171600-31172000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr6:31171600-31172000 Active TSS Primary mononuclear cells fromperipheralblood Blood
50 chr6:31171600-31172000 Active TSS Brain Cingulate Gyrus brain

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