Variant report

Variant rs28397284
Chromosome Location chr6:31166936-31166937
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31164200-31167200 Active TSS Rectal Mucosa Donor 29 rectum
2 chr6:31164400-31168400 Active TSS Duodenum Smooth Muscle Duodenum
3 chr6:31164800-31167000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:31164800-31167000 Active TSS Hela-S3 cervix
5 chr6:31164800-31167200 Active TSS Primary neutrophils fromperipheralblood blood
6 chr6:31164800-31167200 Active TSS Primary T cells from cord blood blood
7 chr6:31164800-31167400 Active TSS Liver Liver
8 chr6:31164800-31167400 Active TSS Rectal Mucosa Donor 31 rectum
9 chr6:31164800-31167400 Active TSS GM12878-XiMat blood
10 chr6:31164800-31167800 Active TSS Rectal Smooth Muscle rectum
11 chr6:31165000-31167400 Active TSS Duodenum Mucosa Duodenum
12 chr6:31166000-31167000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
13 chr6:31166000-31167400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr6:31166200-31167000 Flanking Active TSS Fetal Thymus thymus
15 chr6:31166200-31167000 Enhancers Spleen Spleen
16 chr6:31166200-31167200 Flanking Active TSS Primary B cells from cord blood blood
17 chr6:31166200-31167200 Flanking Active TSS Primary T cells fromperipheralblood blood
18 chr6:31166200-31167200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
19 chr6:31166200-31167200 Weak transcription Stomach Mucosa stomach
20 chr6:31166200-31167800 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr6:31166200-31169800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:31166200-31169800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr6:31166200-31170000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr6:31166200-31170200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr6:31166200-31170400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr6:31166200-31170600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr6:31166200-31170600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr6:31166200-31170600 Weak transcription NH-A brain
29 chr6:31166200-31170800 Weak transcription Placenta Amnion Placenta Amnion
30 chr6:31166200-31171000 Weak transcription HSMMtube muscle
31 chr6:31166200-31171000 Weak transcription Osteobl bone
32 chr6:31166200-31171200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:31166200-31171200 Weak transcription Fetal Lung lung
34 chr6:31166200-31171600 Weak transcription Brain Substantia Nigra brain
35 chr6:31166200-31171600 Weak transcription Ovary ovary
36 chr6:31166200-31171800 Weak transcription Aorta Aorta
37 chr6:31166200-31171800 Weak transcription Fetal Brain Male brain
38 chr6:31166200-31172400 Weak transcription Gastric stomach
39 chr6:31166400-31167000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
40 chr6:31166400-31167000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
41 chr6:31166400-31167000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
42 chr6:31166400-31167000 Flanking Active TSS Adipose Nuclei Adipose
43 chr6:31166400-31167000 Enhancers Fetal Heart heart
44 chr6:31166400-31167200 Flanking Active TSS Primary monocytes fromperipheralblood blood
45 chr6:31166400-31167200 Active TSS Thymus Thymus
46 chr6:31166400-31167400 Weak transcription Brain Hippocampus Middle brain
47 chr6:31166400-31168200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr6:31166400-31168400 Flanking Active TSS Primary hematopoietic stem cells blood
49 chr6:31166400-31168400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
50 chr6:31166400-31169800 Weak transcription HMEC breast

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