Variant report

Variant rs9380222
Chromosome Location chr6:31167213-31167214
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31164400-31168400 Active TSS Duodenum Smooth Muscle Duodenum
2 chr6:31164800-31167400 Active TSS Liver Liver
3 chr6:31164800-31167400 Active TSS Rectal Mucosa Donor 31 rectum
4 chr6:31164800-31167400 Active TSS GM12878-XiMat blood
5 chr6:31164800-31167800 Active TSS Rectal Smooth Muscle rectum
6 chr6:31165000-31167400 Active TSS Duodenum Mucosa Duodenum
7 chr6:31166000-31167400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
8 chr6:31166200-31167800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr6:31166200-31169800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:31166200-31169800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr6:31166200-31170000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr6:31166200-31170200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr6:31166200-31170400 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr6:31166200-31170600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr6:31166200-31170600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr6:31166200-31170600 Weak transcription NH-A brain
17 chr6:31166200-31170800 Weak transcription Placenta Amnion Placenta Amnion
18 chr6:31166200-31171000 Weak transcription HSMMtube muscle
19 chr6:31166200-31171000 Weak transcription Osteobl bone
20 chr6:31166200-31171200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr6:31166200-31171200 Weak transcription Fetal Lung lung
22 chr6:31166200-31171600 Weak transcription Brain Substantia Nigra brain
23 chr6:31166200-31171600 Weak transcription Ovary ovary
24 chr6:31166200-31171800 Weak transcription Aorta Aorta
25 chr6:31166200-31171800 Weak transcription Fetal Brain Male brain
26 chr6:31166200-31172400 Weak transcription Gastric stomach
27 chr6:31166400-31167400 Weak transcription Brain Hippocampus Middle brain
28 chr6:31166400-31168200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr6:31166400-31168400 Flanking Active TSS Primary hematopoietic stem cells blood
30 chr6:31166400-31168400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
31 chr6:31166400-31169800 Weak transcription HMEC breast
32 chr6:31166400-31170000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr6:31166400-31170000 Weak transcription Fetal Muscle Trunk muscle
34 chr6:31166400-31170000 Weak transcription Right Ventricle heart
35 chr6:31166400-31170000 Weak transcription HUVEC blood vessel
36 chr6:31166400-31170800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:31166400-31170800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr6:31166600-31167400 Flanking Active TSS Dnd41 blood
39 chr6:31166600-31167600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr6:31166600-31168200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
41 chr6:31166600-31169800 Weak transcription Fetal Intestine Large intestine
42 chr6:31166600-31170200 Weak transcription Small Intestine intestine
43 chr6:31166600-31170800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:31166600-31171200 Weak transcription HSMM muscle
45 chr6:31166800-31167400 Enhancers Primary T killer memory cells from peripheral blood blood
46 chr6:31166800-31167400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr6:31166800-31167400 Enhancers Skeletal Muscle Female skeletal muscle
48 chr6:31166800-31167400 Enhancers K562 blood
49 chr6:31166800-31167600 Enhancers Colon Smooth Muscle Colon
50 chr6:31166800-31167600 Weak transcription Skeletal Muscle Male skeletal muscle

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