Variant report

Variant	rs17191267
Chromosome Location	chr15:60424503-60424504
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10162872	0.84[EUR][1000 genomes]
rs1481845	0.82[EUR][1000 genomes]
rs17270013	0.88[EUR][1000 genomes]
rs9635355	0.85[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904280	chr15:60042722-60524025	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60421800-60426600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr15:60421800-60426600	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr15:60421800-60429200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr15:60421800-60429600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr15:60422800-60429200	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr15:60423000-60428200	Weak transcription	HSMM	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links