Variant report

Variant	rs17211707
Chromosome Location	chr4:127967052-127967053
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:127963640..127966390-chr4:127966752..127969246,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs1552089	0.80[CEU][hapmap]
rs17212899	0.83[CEU][hapmap]
rs17291185	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127965200-127967800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:127965200-127970800	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr4:127965400-127967400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:127965400-127967600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr4:127965400-127968000	Enhancers	H1 Cell Line	embryonic stem cell
6	chr4:127965400-127968200	Enhancers	Dnd41	blood
7	chr4:127965400-127968800	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr4:127965600-127967800	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr4:127965800-127967600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr4:127965800-127971200	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr4:127966000-127967600	Enhancers	H9 Cell Line	embryonic stem cell
12	chr4:127966000-127967600	Enhancers	NHLF	lung
13	chr4:127966000-127968400	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr4:127966000-127968800	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr4:127966000-127971000	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr4:127966200-127967400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr4:127966200-127967600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr4:127966200-127967600	Enhancers	NHDF-Ad	bronchial
19	chr4:127966400-127967200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr4:127966400-127967400	Enhancers	NH-A	brain
21	chr4:127966600-127967200	Enhancers	Osteobl	bone
22	chr4:127966600-127967400	Enhancers	Fetal Brain Female	brain
23	chr4:127966600-127967400	Enhancers	HSMM	muscle
24	chr4:127966600-127967600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr4:127966600-127967600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr4:127966600-127967600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr4:127966600-127967600	Enhancers	HMEC	breast
28	chr4:127966600-127969000	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr4:127966600-127972800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr4:127967000-127967600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr4:127967000-127967600	Enhancers	NHEK	skin
32	chr4:127967000-127976200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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